Perognathus longimembris pacificus (Pacific pocket mouse): 125354911
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Entry
125354911 CDS
T08928
Symbol
Col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125354911 (Col8a2)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
125354911
NCBI-ProteinID:
XP_048206845
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All DBs
Position
7:complement(22858719..22882350)
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AA seq
700 aa
AA seq
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MPGSLMPLSSMLLLLLLGCGPRGSAGGGAGGAAGYAPVKYVQPMQKGPVGPPFREGKGQY
LEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGLHGQPGPAGPPGFSRMG
KSGAPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGMTVPGKPGAQGVPGP
PGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDG
LPGAPGDKGESGIPGVPGPRGEPGAVGPKGPPGVDGMGVPGAAGVPGPQGPTGAKGEPGI
RGPPGLIGPTGYGMPGLPGPKGDRGPTGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLP
GSAGLPGRRGPPGPKGDAGPGGPPGVPGIRGDQGPSGLAGKPGLPGERGLPGAHGPPGPT
GPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPTGPIGPQGLPGLK
GEPGLPGAPGEGKVGEPGTAGPTGPPGVPGTPGLTGPPGPPGPPGPPGAPGALDETGIAG
LHLPNGGVEGAVLGKGYKPQFGLGELSAHSTPAFTAVLTSPFPASGMPVKFDRTLYNGHS
GYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGA
VLQLQPNDQVWVQMPSDQANGLYSTKYIHSSFSGFLLCPT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtctctaatgcccctgtcttccatgctgctgctgctgttgctggggtgtgga
ccacgggggtctgctggtggcggggctggtggggcagcaggctacgccccagtgaagtac
gtgcagcccatgcagaaggggcccgtgggaccgcccttccgtgagggcaagggccagtac
ctggaaatgcctctaccactgttgccgatggacttgaaaggagagcctggcccccctggg
aagcctgggccccgggggccccctggtcctcctggcttccctggaaagcctggcactgga
aagccagggctccatgggcagcctggccctgctggtccccctggcttctcccggatgggc
aagtctggtgctccaggactcccaggcaaggttggaccaccagggcagcctgggcttcgg
ggggagccagggataagaggagatcagggtctccgggggcccccagggccccctggcctg
cctggcccctcaggcatgactgtcccaggaaaaccaggtgcccaaggggtgccaggtccc
ccaggatttcagggagagccaggacctcagggggagcctggacccccaggagatagaggc
cttaaaggggataatggagtaggtcagccagggcttcctggagcccctgggcaagggggt
gcccctgggccccctggcctccctggtccagctggcttgggcaaaccgggcttggatgga
ctccctggagcccctggagacaagggagagtctgggattcctggggttccaggccctagg
ggggagccaggcgctgtgggtccaaaaggcccccctggggtagatggtatgggggtgcca
ggggctgcaggggtgccagggccacagggcccaactggggccaaaggggagccagggatt
cggggccctcctggcctgataggtcctaccggttatggtatgccaggattgccaggtccc
aagggggacagaggccccacgggggttccagggctcttaggggacaggggtgagccaggg
gaagatggagagccaggggagcagggcccacagggcctcgggggtccccctggacttccc
gggtctgcagggctccctggtagacgtgggcctccagggcccaagggcgatgcagggcct
ggaggacccccaggagtacctggcattcggggtgaccaagggcccagtggtctggctggg
aaacctgggcttccaggtgagaggggacttcctggggcccatgggcctcccgggccaacc
gggcccaaaggtgagccagggttcacaggccgccccggaggaccaggggtggcaggagcc
ctaggacagaaaggcgacctggggctccctgggcagcctggcctgaggggcccctcagga
atcccaggactccagggcccaactggtcctatcgggccccagggtcttccgggcctgaag
ggtgagccaggcctgccgggggcccccggagaggggaaagtgggggaacctggcactgct
ggtcccacaggccctcctggcgtcccaggtaccccaggactcacaggccctcctgggcct
cctgggcctccaggccctcccggagccccaggggccttggatgagactggcatcgcaggc
ttgcacctgcccaatggcggggtagagggcgctgtgctgggcaaggggtacaagccccag
tttgggctgggtgagctgtcggcccacagcaccccagccttcactgccgtgctcacatct
cccttccccgcttccggcatgccagtgaagtttgaccggactctctacaacggccacagc
ggctacaacccggccactggcatcttcacttgcccggtgggcggcgtctactactttgct
taccatgtgcatgtcaagggcaccaacgtgtgggtggctctctacaagaacaacgtgccc
gccacctacacctacgacgaatacaagaagggctacctggaccaggcatctggcggggcc
gtgctccagctgcagcctaacgaccaagtctgggtgcagatgccctcggaccaggccaat
ggcctctactccaccaagtacatccactcttccttttcgggattcttgctctgccccaca
taa
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