Perognathus longimembris pacificus (Pacific pocket mouse): 125354930
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Entry
125354930 CDS
T08928
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125354930 (Zc3h12a)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125354930 (Zc3h12a)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
125354930
NCBI-ProteinID:
XP_048206876
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All DBs
Position
7:23944605..23953417
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AA seq
591 aa
AA seq
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MNGPCDTDRPILEADPIMSLWSPEDSHSCQGTPKPAQEPTTEEALASELQMKLDFFRKLG
YSSSEIHGVLQKLGAHADTNTVLGELVKHGSASEREHQAPPDPGPQLPLVPRGGGTPKAP
TLEPVLPEEDKEGSHLRPVVIDGSNVAMSHGNKEIFSCRGILLAVNWFLERGHTDITVFV
PSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAFESDGV
VVSNDTYRDLQNERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPS
EHRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPSKDKSSQRPS
PTPKSTSVPPDSEQNSLDGKKLGVQASPRLHHDGLTPAFAPAGRSLPLSSGSSFGPLDWP
PQTLDSLPYTSQDPLDSGIGSLESQMSELWGVRGSAGEPAPARGPYSGYRPYGSEHPAAP
AFPAFGHFSVPADYAPPPPAFAPREYWSEPYPLPPPTPGLQKPQVPSPGAGSIPWSRVGS
LAKERAGVYTKLCGVFPPHLVEAAMARFPQLLDPQQLAAKILSYKSQHLSE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcccctgtgacacagacaggcccatcctggaagccgaccccatcatgagtttg
tggagtcctgaggacagccacagctgtcagggaacccccaaaccggcccaggaacctacc
actgaagaggccttggcttcagagctgcaaatgaagttggacttcttccggaagctgggc
tattcatcctctgagatccacggagtcctacagaaactgggggcccatgcagacactaac
actgtgctaggggagctggtgaaacatggctcggcttcggagcgggagcaccaggccccg
ccagaccctggccctcagctccctctggtgccccggggtgggggcacccctaaggctccc
accctggagcctgtactcccagaagaggacaaagaaggcagccacctgaggcctgtggtc
atcgatggaagcaatgtggccatgagccacgggaacaaggagatcttctcctgccggggc
atcctgctggctgtgaactggtttctagagcggggccacaccgacatcacagtgttcgtg
ccatcctggaggaaggagcagccccggcccgacgtgcccatcacagaccagcacatcctt
cgggagctggagaagaagaagatcctggtgttcaccccgtctcggcgggtgggcggcaag
agggtggtgtgctacgacgaccgcttcatcgtgaagctggccttcgagtctgacggcgtt
gtggtctccaacgacacctaccgcgacctccagaacgagcggcaggagtggaagcgcttc
atagaggagcggctgctcatgtactccttcgtcaacgacaagttcatgccccctgatgac
cccttgggcaggcatgggcccagcctggacaacttcttgcgtaaaaagccactgccttct
gagcacaggaagcagccctgcccctacggaaggaagtgcacctatgggatcaagtgccga
ttcttccaccctgagcggccaagccgaccccagcgctccgtggccgacgagctccgggcc
aatgccctcctctcacctccccggacccccagcaaggacaaaagtagccagcggccttca
cccaccccaaagtccacatctgtgcccccagacagcgagcagaacagcctggatgggaag
aagctgggggtccaggcatccccaaggctccaccatgatgggctgacaccagctttcgcc
ccggcaggcaggagcctcccccttagtagtggcagcagctttgggcccctagactggccc
ccccagaccctggactcgctcccatacacgtcccaggaccccctagattctggcattggc
tccttggagagtcagatgtcagaactgtggggggtgcgaggaagtgctggagagccagcc
cctgctcgaggcccttactctggctaccgcccctatgggtccgaacaccctgccgcccct
gccttccctgcttttggccacttcagtgtccccgctgactatgcgcctcccccacccgcc
tttgcaccccgagagtactggtctgagccgtacccactgcccccgccaaccccgggcctt
cagaagccccaggtgcccagcccaggggctggcagcatcccctggagcagggtgggcagc
ctggccaaggagcgggctggtgtgtacaccaagctgtgcggcgtctttcccccacacctg
gtggaggccgcgatggcgcgcttcccacagctcctggacccccagcagctggctgccaag
atcctctcctacaagtcccagcacctcagtgagtga
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