Perognathus longimembris pacificus (Pacific pocket mouse): 125354978
Help
Entry
125354978 CDS
T08928
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04820
Cytoskeleton in muscle cells
plop04974
Protein digestion and absorption
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125354978 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125354978 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125354978 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125354978 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125354978 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125354978 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125354978 (Col9a2)
Proteoglycans [BR:
plop00535
]
Extracellular matrix (ECM) proteoglycans
Others
125354978 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125354978
NCBI-ProteinID:
XP_048206948
LinkDB
All DBs
Position
7:complement(26183624..26199291)
Genome browser
AA seq
688 aa
AA seq
DB search
MATPAAGRSLLLLLQVLGLVLAQIRGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGPKGEPGKPGPDGPDGKPGIDGLMGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGIPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGKRGVLGDPGRQGKPGPKGAVGASGEQGIPGPPGPQGIRGYPGVAG
PKGETGPRGYKGMVGSIGAAGLPGEEGPRGPPGRAGEKGDVGSQGVRGPQGIMGPKGATG
PPGIDGKDGTPGIPGTKGSAGQAGRPGSQGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPG
FSGPSGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGAQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGQAGNRGLPGHPGRQGVPGRDASDQHIIDVALKMMQEQLAEVA
VSAKREVLGAAGMVGPPGPPGPPGYPGKQGAHGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGIPGFPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP
GFCEPAACLGASAYASARLTEPGTIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccggccgccggccgcagcctgctgctgctcctccaggtgctcgggctcgtc
ctggcgcagatcagaggtcctccgggagagccggggcccccgggacccccagggccgccg
ggagtgcctggttcggatggcatcgacggtgacaaggggccccctgggaaagctggccct
ccgggacccaaaggagagcctggcaaaccggggcccgatgggcccgatgggaagccgggc
attgacggcttaatgggagccaagggggagcctggacccatgggaactcctggagtcaag
ggtcagccaggacttccaggcccccctggtctgccgggtcctggtttcgctgggcctcct
ggaccacctggacctgttggtcttcctggtgagattggaatcccaggccccaagggggat
ccaggaccagagggaccctcaggacccccaggtcctcctgggaaaccggggcgcccagga
accatccaaggcctggaaggcagtgcagatttcctgtgtccaaccaattgtccagcaggt
gtgaaaggtcctccagggctgcagggagtcaagggccatccaggcaaacgtggggttctg
ggggatcctggccgtcaggggaagccgggccccaagggagctgtgggtgcttctggagaa
caaggcatccccggaccaccgggaccccaaggcatcaggggctacccaggtgtggcagga
cccaagggagagactggtcctcgtgggtacaaaggcatggttggctccatcggcgctgcc
gggttaccgggtgaggaaggtccaagggggccaccaggccgagctggggagaagggtgac
gtgggtagccaaggtgttcgaggaccacaggggataatgggcccaaagggagcaacgggt
cctccaggcatcgatggcaaggatgggactccaggcatacctggcaccaagggcagtgca
ggacaggcagggcggccaggaagccagggtcaccagggcctggcgggtgtgccgggccag
cctgggacaaaaggaggccctggagacaagggtgagccgggccagcagggcctccctgga
ttctctggtccctctggaaaggagggagagccagggcctcgaggagaaattggtccccag
ggcattatgggacagaagggtgaccagggtgagaggggcccagtgggacagccaggtccc
caaggacgacagggcccaaagggggagcaaggccccccaggaattccaggagcccaaggc
ttaccaggcatcaaaggagacaagggctccccagggaagactgggccccgtggtggagtg
ggtgacccgggtgtggcgggcctcccaggagagaaaggggagaagggcgagtctggtgag
ccagggccaaagggacagcaaggagtccgaggagagccaggctaccctggccccagcggg
gatgcgggcgccccaggcgtgcaggggtacccagggctgcctggccctcgaggacaagct
ggaaacagaggcttgccaggccatccgggaagacagggtgtgccgggtcgagatgccagt
gaccagcacatcatagacgtggcgctgaagatgatgcaagagcaactggcagaggtggct
gtgagtgccaaacgggaagtcctgggtgcagccggcatggtgggtcccccaggacctccg
gggcctcctggatatccaggcaagcaaggagcgcatgggcaccctggccctcggggcatt
cctggcatcgtgggagccgtaggtcaaattggcaacacaggacccaagggaaagcgtgga
gagaagggtgatcaaggagaagtaggacgtgggcaccctgggatgccaggtcccccaggg
atcccaggattccctggccggcctggccaggcaatcaatggcaaagatggagaccgaggg
tccccaggggctccaggagaggcaggtcgacctggcctgccaggccccgtggggctgcct
ggcttctgtgagcccgcagcctgccttggagcttcagcttatgcctctgcccgtctcaca
gagcctgggaccatcaaggggccatga
DBGET
integrated database retrieval system
