Perognathus longimembris pacificus (Pacific pocket mouse): 125355009
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Entry
125355009 CDS
T08928
Symbol
Ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125355009 (Ybx1)
03019 Messenger RNA biogenesis [BR:
plop03019
]
125355009 (Ybx1)
03041 Spliceosome [BR:
plop03041
]
125355009 (Ybx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
125355009 (Ybx1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125355009 (Ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
125355009 (Ybx1)
Spliceosome [BR:
plop03041
]
Common components
Common spliceosomal components
General mRNP proteins
125355009 (Ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
125355009
NCBI-ProteinID:
XP_048207008
LinkDB
All DBs
Position
7:27812609..27831428
Genome browser
AA seq
324 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKAADPPAENSSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgctgccgacaccaagcccggcaccacgggcagcggcgcagggagcggcggcccgggc
ggcctcacatcggcggcgcctgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaaggaacggatatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagcaaatgttacaggtcctggtggcgttccagttcaaggcagtaaatatgcagca
gaccgtaaccattatagacgctatccacgtcgtaggggtcctccacgcaattaccagcag
aattaccagaacagtgagagtggggaaaagaatgagggatcagagagtgctcccgaaggc
caggcccaacaacgccggccctaccgcagacgaaggttcccaccttactacatgcggaga
ccctatgggcgtcgaccacagtattccaaccctcctgtgcagggagaagtgatggagggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggt
tatagaccacgattccgcagaggccctcctcgccaaagacagcctagagaggatggtaat
gaagaagataaggaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcgg
taccgccgcaacttcaattaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagacaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcag
ggcggggctgagtaa
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