Perognathus longimembris pacificus (Pacific pocket mouse): 125355048
Help
Entry
125355048 CDS
T08928
Symbol
Slc6a9
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04082
Neuroactive ligand signaling
plop04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125355048 (Slc6a9)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
125355048 (Slc6a9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125355048 (Slc6a9)
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125355048 (Slc6a9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125355048
NCBI-ProteinID:
XP_048207082
LinkDB
All DBs
Position
7:complement(28949637..28983402)
Genome browser
AA seq
629 aa
AA seq
DB search
MVGKGAKGMLNGAVPGEATKRDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRN
GGGAFMFPYFIMLIFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIG
IYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTPDCAGVLDASNFTNGSRPNNLSHMLNH
TLQRTSPSEEYWRLYVLKLSEDIGDFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVY
FTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWG
GLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGP
GLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKK
TYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYF
QDIQMMLGFPPPFFFQICWRFVSPAIIFFILIFTVIQYRPITYNRYQYPGWAVAIGFLMA
LSSVICIPLYALFQLCRTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTIAPSPEDG
FEVQPLHPDKAQIPMVGSNGSSRLQDSRI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaaaaggtgccaaagggatgttgaatggtgctgtgcccggcgaggccaccaag
agagaccagaacctcacacggggcaactggggcaaccagatcgagtttgtactgacgagc
gtgggctatgctgtgggcctgggcaatgtctggcgcttcccatacctctgctatcgcaac
gggggaggtgccttcatgttcccctacttcatcatgctaatattctgtgggattcccctc
ttcttcatggagctctcctttggccagtttgcaagccagggctgcctgggagtctggagg
atcagccccatgtttaaaggtgtaggctatggcatgatggtggtctccacatacattggc
atctactacaatgtggtcatctgcatcgccttctactacttcttctcatccatgacacac
gtgctgccctgggcctactgcaataacccctggaatacgcccgactgtgctggcgtgctg
gatgcttccaatttcaccaatggctctcggcccaacaacctctcccacatgctcaaccac
accctgcagagaaccagcccaagtgaggagtactggaggctctacgtgttgaagctgtca
gaagacatcggggactttggggaggtgcggctgcccctcctgggctgcctcggtgtctcc
tgggtagtcgtcttcctctgcctcatcagaggggtcaagtcttcagggaaagtggtgtac
ttcacagccaccttcccctacgtggtgctcaccatcctgttcgtccgtggagtgaccctg
gaaggagccttcacgggcatcatgtattacctgactccacagtgggacaagatcctggaa
gccaaggtgtggggcgatgccgcctcccagatcttctactcactgggctgtgcctggggc
ggcctcatcactatggcttcctataacaagttccacaacaactgctaccgggacagtgtc
atcatcagcatcaccaactgtgccaccagcgtctatgcaggctttgtcatcttctccatc
ctcggcttcatggccaatcacctgggtgtggatgtgtcccgcgtggcagaccacggccct
ggtttggcctttgtggcttacccggaggccctcacactgctgcccatctctccactgtgg
tccctgcttttcttcttcatgctcatcttgctggggctgggcactcagttctgcctcttg
gagacactagtcactgccatcgtggatgaggtggggaatgagtggatcctgcagaagaag
acctatgtgacattgggtgtggctgtggctggcttcctgttgggcatccccctgaccagc
caggcaggcatctactggctgttgctgatggacaactatgcagccagcttctccctggtt
gtcatctcctgcatcatgtgtgtgtccatcatgtacatttatgggcaccggaactacttc
caagacatccagatgatgctgggcttccctccacctttcttcttccagatctgctggcgc
tttgtctctccagccatcatctttttcattctcatcttcacggtgatccagtaccggcca
atcacctataaccgctaccagtacccaggctgggccgtggccatcggcttcctcatggcc
ctgtcctctgtcatctgcatcccactctacgccctgttccagctctgtcgcaccgatggg
gacactctcctccagcgtttgaaaaatgccacaaagccaagcagagactggggccctgcc
ctcctggagcatcggactgggcgctatgcccccaccatagccccctctcctgaagatggg
ttcgaggtccagccactgcacccggacaaggcccagatccccatggtgggcagtaatggc
tccagccgccttcaggactcccggatatga
DBGET
integrated database retrieval system
