Perognathus longimembris pacificus (Pacific pocket mouse): 125355063
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Entry
125355063 CDS
T08928
Symbol
Ptch2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04340
Hedgehog signaling pathway
plop05200
Pathways in cancer
plop05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125355063 (Ptch2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125355063 (Ptch2)
09162 Cancer: specific types
05217 Basal cell carcinoma
125355063 (Ptch2)
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Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
125355063
NCBI-ProteinID:
XP_048207113
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All DBs
Position
7:complement(29674276..29691606)
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AA seq
1199 aa
AA seq
DB search
MARPPSLEEVPRCCRTPPVRSVAPQILAGSLKAPLWLRAYFQGLLFSLGCRIQRHCGKVL
FLGLLAFGALALGLRVAVIETDLEELWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTA
RQEGENILTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEK
LFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLD
KAQVGQAYVGRPCLDPTDAHCPPSAPNHLSRQAPDVAQELSGGCHGFSHKFMHWQEELLL
GGMARDLQGRLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQASTVLQAWQRRF
VQLAQEALPENASQQIHAFSSTTLDDILHTFSEVSAARVAGGYLLMLAYACVTMLRWDCA
QSQGAVGLAGVLVVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDVFLLAHAFT
EAPPGTPLQERLGECLQRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCSF
VAVMLVFPAVLSLDLRRRHCQRLDVLCCFSSPCSARMIQILPQELGERTVSVGITHLTTT
VQAFTHCEASSQHVVTILPPQAHLVPAPSDPLSSELFSPGGSTRDLLGQEERTRPRAACK
SLPCARWNLAHFARYQFAPLLLQSQAKAMVLVFFGALLGLSLYGATLVQDGLSLTDVVPR
GTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPR
TWLHYYRDWLQGIQAAFDQDWASGRITHHSYRNGSEDGALAYKLLIQTGNAQEPLDFSQL
TTRKLVDEEGLIPPEFFYVGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRI
PAAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACAEAGRAGVHAYPSGSPFLFWEQYLG
LRRCFLLAICILLVCTFLVCALLLLNPWMAGLIVLVLAMMTVELFGIMGFLGIKLSAIPV
VILVASVGIGVEFTVHVALGFLTMQGSRNLRATRALEHTFAPVTDGAVSTLLGLLMLAGS
NFDFIVRYFFLVLTALTLLGLLHGLMLLPVLLSILGPPPEVVQIYKESPRVLGPATPRGG
RLGWGASPTLRQNFARVTTSMTVALHPPPLPGAYIHPASDEPTWSPAASGSSNSSSRGS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccaccgtccctggaagaagtgccccgatgctgccgtacacccccagttcga
tccgttgcacctcagatcctagctgggagcctgaaggctcccctctggcttcgtgcttac
ttccagggcctgctcttctctctgggctgcaggatccagagacactgtggcaaagtgctc
ttcctgggactgttggcctttggggccctggcactgggtctccgtgtggctgttattgag
actgacctggaagaactctgggtagaagtgggcagccgggtaagccaggagctgcattac
accaaggagaaactgggggaggaggccgcatacacctcccagatgttgattcagactgct
cgccaggagggagagaatatcctcacgcctgaagcgcttggcctccacctccaggcagcc
ctcactgccagtaaagtgcaagtgtcactctatggaaagtcctgggatctgaacaaaatc
tgctacaaatctggagttccccttattgaaaatgggatgattgagaggatgattgagaag
ctatttccatgtgtgatcctcaccccacttgactgcttctgggagggagccaaactccaa
ggaggctctgcctacttgccgggccggcctgacatccagtggaccaatttggatcctgaa
cagctgctagaggagctaggcccctttgcctcccttgagggcttccgggaactactagac
aaggcacaagtgggccaggcctatgtgggacggccctgtctggaccccacggatgcccac
tgcccacctagtgcccccaaccatctcagcagacaggctcccgatgtggcccaggagctg
agtgggggctgtcatggcttctcccacaaatttatgcactggcaggaagagttgctgttg
ggaggcatggccagagaccttcaaggacggctgctgagggcagaggccctgcagagcacc
ttcctgctgatgagtccccgccagctgtacgagcacttccgtggtgactatcagacgcac
gacattggctggagtgaggagcaggccagcactgtgctgcaggcctggcagcggcgcttt
gtacagctggcccaggaagcccttcctgagaatgcttcccaacagatccacgccttctcc
tccaccaccctggatgacatcctgcacacgttctctgaagtcagtgctgctcgtgtggca
ggaggctatctgctcatgctggcctatgcctgtgtgaccatgctacggtgggactgtgcc
cagtcccagggtgcggtgggcctggctggggtgttggtggtggccctggcagtggcttcc
ggcctcgggctctgtgccctgctcggcatcaccttcaatgctgccactactcaggtgcta
cccttcttagctctgggcattggagtggatgacgtattcctgctggcacatgcattcaca
gaggctccacctggcacccctctccaggagcgcctgggcgagtgcctgcagcgcacaggc
accagtgttacactcacgtctatcaacaacatggttgccttcttcatggctgccctggtt
cccatccctgccctgcgcgccttctccctgcaggcagccatagtggttggctgtagcttt
gtggccgtgatgcttgtcttcccagcggtcctcagcctagacctgcgccgacgccactgc
cagcgcctggatgtgctctgctgcttctctagcccctgctctgctcgtatgattcagatt
ctaccccaggagctgggcgagaggacagtctctgtgggcatcacccacctgacgaccacg
gtgcaagcattcacacactgtgaagccagcagccagcatgtggtcaccattctgcctcct
caagcccacctggtaccggcaccttctgacccactgagctctgagcttttcagccctgga
gggtctacacgggatcttctgggccaagaggagagaacaaggcctagggcagcctgcaag
tccctgccctgtgcccgctggaatcttgcccattttgcccgctatcagtttgctcccttg
cttctccagtcacaagccaaggctatggtgctggtgttctttggagctcttctgggcctg
agcctctacggagccaccttggtgcaggacgggctgtccctgacagatgttgtacctcga
ggcaccaaggaacacgccttcctgagtgctcagctcaggtacttctccctgtatgaggta
gccctggtgacccagggtggctttgactacgcccactcccaacgtgccctctttgatctg
caccagcgcttcagttccctcaaggctgtgctgccccctcctgccacccaggcgccccgt
acctggctgcactactaccgcgactggctgcagggaatccaggctgcatttgaccaggac
tgggcttctgggcgcattacccatcattcctaccgaaacggctcagaggatggggcactg
gcctacaagctgctcatacagaccggaaatgcccaggagcccctggattttagccagctg
accacaagaaagctggtagatgaggagggactgattccaccagagttcttctacgtgggg
ctaacagtgtgggtgagcagtgaccccctgggtctggcagcctcccaagccaacttctac
cccccacctccagaatggctccacgacaaatatgacaccactggggagaatctgcgcatc
ccagctgcccagcccctggagtttgcccagttccccttcctgctgcatggcctccagaag
actgcggactttgtggaggccattgagggggcccgggcagcttgtgcagaggcaggccgg
gcaggggtgcacgcctaccccagtggctcccccttcctcttctgggagcagtatctgggc
ctgcgacgctgcttcctgctggccatctgcatcctgctggtgtgtaccttcctggtctgt
gccctgctgctactcaacccatggatggctggcctcatagtgctggtcctggcgatgatg
accgtggagctctttggaatcatgggtttcctgggtatcaagttgagcgccatccccgtg
gtgatcctcgtggcctctgtaggcattggcgtcgagttcacagtccacgtggctctgggc
ttcctgaccatgcagggcagccggaaccttcgggctacccgagccctggagcacacattt
gcccctgtgactgatggagccgtctccactttgctgggcctgctcatgcttgctggctcc
aactttgacttcattgtaaggtacttcttcctggtgctaaccgccctcacactcttgggc
ctcctccatggactcatgctgctgcctgtgctgctttccattctggggcccccaccagag
gtggtccagatatacaaggagagcccaagggtcctgggccctgcaactccacggggaggc
agacttgggtggggggcatcccccaccctccgccagaactttgccagagtgactacctcc
atgaccgtggctctccacccaccccctctacctggtgcctacatccacccagcctctgac
gagcccacatggtccccagctgccagtggctctagcaactccagttctagaggatcatag
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