Perognathus longimembris pacificus (Pacific pocket mouse): 125355164
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Entry
125355164 CDS
T08928
Symbol
Prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125355164 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125355164 (Prpf38a)
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125355164 (Prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
125355164 (Prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
125355164
NCBI-ProteinID:
XP_048207282
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All DBs
Position
7:34738683..34755256
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtgaaggatgcgcatagcatccatggcaccaaccctcagtatctg
gtggagaagatcattcggacgcgaatctacgagtctaaatactggaaagaagagtgcttt
gggcttacagctgaacttgtagtggataaagccatggagttgaggtttgtcggtggcgtc
tatggtggaaacataaaaccaactccctttctgtgtttaaccttgaagatgcttcagatt
caacctgagaaggatatcattgttgaatttattaaaaatgaagatttcaagtatgttcgt
atgttgggggcactttacatgaggctgacaggcactgcaattgattgctacaagtatttg
gagcctttgtacaatgactatcgaaaaatcaagagccagaaccgaaatggagaatttgaa
ctaatgcatgtagatgagttcattgatgaactactgcacagtgagagagtctgtgatatt
attcttccccggctacagaaacgctatgtgcttgaggaggctgagcagctggaacctcga
gtgagtgctctagaagaagacatggatgatgtggagtccagtgaagaggaggaagaagaa
gacgagaagctggaaagagtgccatcacctgatcaccgtcggagaagttaccgagaccta
gacaagccccggcgatctcctacactgcgctacaggaggagtaggagtcggtcacccaga
aggcggagtcgatcacccaaaagaagaagcccctctccccgccgagaaaggcatcggagc
aagagtccaagacgtcaccgaagcaggtcccgagatcgaaggcacagatctcgctccaaa
tctccaggtcatcaccgtagtcacagacataggagccactcaaagtctccagaaaggtcc
aagaagagccataagaagagcaggagagggaatgagtaa
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