Perognathus longimembris pacificus (Pacific pocket mouse): 125355264
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Entry
125355264 CDS
T08928
Symbol
Dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125355264 (Dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125355264 (Dnajc6)
03110 Chaperones and folding catalysts [BR:
plop03110
]
125355264 (Dnajc6)
04131 Membrane trafficking [BR:
plop04131
]
125355264 (Dnajc6)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125355264 (Dnajc6)
Chaperones and folding catalysts [BR:
plop03110
]
Heat shock proteins
HSP40 / DNAJ
125355264 (Dnajc6)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
125355264 (Dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
125355264
NCBI-ProteinID:
XP_048207441
LinkDB
All DBs
Position
7:45241551..45378870
Genome browser
AA seq
974 aa
AA seq
DB search
MSLLGSYRKKASSDGYESLQLVDSNGDLSAGGSKPRVTAGGAAAARSPARQPPDRASTMD
SSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVASYTKGDLD
FTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRV
SECSWPVRQAPSLHNLFAVCKNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLY
STPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLAEKPYRPHFKPLTIKAITVSPIPFFN
KQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRS
TIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDVEL
QPHDKVIDLTPPWEHYCTKDVNPSILFSSHQEHQDTLALGGQAPLDVPPDNPRQLGQGGF
FASLCWQDQKSEKALCEEDHAALVNQESEQSDDELLTLSSPHGNANGDRQHGAKKASRKQ
QEPAAPPAAEEEVDLLGLEGSDMSKNFSPPLAPPTNSELLSDLFGGGGAAGPAQAGQPGM
EDVFHPSGPSSAQSTPRRTATSASASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLSTSN
ASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGSWDWHAKPGGFGMGSKSAATSPTGSSH
GTPTHQNKPQTLDPFADLGTLGTNLSGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMG
GGWQQAGGYNWQQSQPKPQPSMPHSSPQNRPNYNVSFSSMPAGQSERGKGSTNLEGKQKA
ADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLST
MHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELND
AWSEFENQGQKPLY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcggaagctatcggaaaaaggccagcagcgatgggtacgaatctttgcag
ctggtggacagtaacggagacctaagcgcgggtggcagcaagccgcgagtgacggcgggc
ggcgcggcggcggcgcggagtcccgcccggcagcctccggaccgcgccagcaccatggac
agctcaggtgcctcatctccagacatggagcccagctatgggggaggtctctttgacatg
gtgaaaggaggtgcagggaggctttttagtaacctaaaggacaacttgaaagacacactc
aaagacacatcttctagagtcatacaatctgtggccagctacacaaagggagatttagac
ttcacttatgttacctccagaattattgtgatgtcctttcctctggacaatgttgacata
ggattcaggaatcaggttgatgatatccggagcttcttagattccagacatctggaccac
tacacagtctacaatctgtcacccaagtcctatcgaactgccaagtttcacagtcgggtc
tcagaatgcagttggcccgttaggcaggccccaagtctgcacaacctctttgctgtgtgt
aagaatatgtacaactggctgctacagaatcccaaaaatgtctgcgttgtccactgcctg
gatggacgggcagcatcgtctattctggttggtgctatgttcattttctgtaatctctac
tccactcctggccctgctgttcgattgctctatgcaaagcgacctggaattggactctca
ccatcccacaggagatatctgggctatatgtgtgacctactagcagaaaaaccctaccgt
ccacacttcaagcctctcactatcaaggctatcactgtcagtccaattccttttttcaac
aaacagagaaatggatgtcgcccttactgtgatgtgctgattggagaaaccaaaatatac
tcaacctgtacagattttgaacgaatgaaagaatatcgtgttcaagatgggaaaatcttc
attcccttaaacatcactgtacaaggagatgtgattgtttccatgtatcatttgaggtcc
accattgggagccggctgcaagctaaggtgactaacacacagatattccagctccagttt
cactctggattcataccactggacaccaccgttttaaagttcaccaagcctgagttggat
gcatgcgatgtaccagaaaaataccctcagctatttcaagtgacattagatgtcgagtta
cagccccatgacaaagtgatagacttaaccccaccatgggagcattattgcacgaaagac
gtcaatcctagcatcctcttctcttctcaccaggaacatcaggatactctggccttagga
ggacaggctccactagacgtccctcctgacaaccccaggcagttggggcaaggtggtttc
tttgcctctctctgttggcaagatcagaaatcagagaaagcattgtgcgaggaggatcac
gctgccctagtgaaccaggaaagcgagcaatcggatgatgaacttctgaccctttctagt
cctcatggcaacgccaatggcgacaggcagcatggagccaagaaggccagcagaaagcag
caggagccagctgcccctcccgctgctgaggaggaggtggaccttctgggattagaaggc
tctgatatgagtaagaacttctctcccccattggctcctcccacaaattccgaactactg
agcgacctgttcggaggtggaggcgctgctggtcctgcccaggcaggacagccagggatg
gaagatgtgtttcatcctagcggtccttcatccgcccagtcaacaccgcgccgcaccgcc
acctcggcttctgcatcaccgacccttcgagtgggagaaggtgccacctttgacccgttt
ggagcaccttctaagccatcgggtcaggatctgctgggttctttcctgagcacatccaat
gcttccagtgacccctttctacagcctactagaagtccttcacctacagtgcatgcttcc
agtacccctgctgtgaacattcagccagatgtttctggaagttgggattggcatgccaaa
ccaggaggttttggaatggggagcaaatcagctgccaccagccccacaggatcctcgcat
ggcacccccacccatcagaacaagccccagactctggatccttttgctgaccttgggaca
ctaggtacaaacctatcaggtagttcttcatttgccagcaaacccactacaccgactgga
ctgggtggaggattcccacctctcagctctccccagaaagcatctccccagcccatgggt
ggagggtggcaacaggctgggggctacaactggcagcaatcacagcccaagccacaaccc
agcatgccacactcctccccccagaatcgacccaactacaatgtgagcttttcatccatg
cctgctggccagagtgaacgaggaaaaggatcaactaatttggaagggaagcaaaaagca
gctgactttgaagatttactttcaagtcaaggttttaatgctcacaaagacaaaaagggg
cctcgaacaatagcagagatgagaaaggaggaaatggctaaggaaatggatcctgagaaa
ttaaagatcctggaatggatagaaggtaaagagagaaatatcagagcccttctctccact
atgcacactgtgttgtgggctggggagaccaagtggaaaccagttggaatggcagacctg
gtaacaccagagcaggtgaagaaggtgtacagaagggcggtgctggttgtgcacccagat
aaagctactgggcaaccctatgaacagtatgcaaagatgattttcatggagctaaatgat
gcctggtctgaatttgaaaaccaaggccaaaagcccttgtattaa
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