Perognathus longimembris pacificus (Pacific pocket mouse): 125355295
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Entry
125355295 CDS
T08928
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00260
Glycine, serine and threonine metabolism
plop00270
Cysteine and methionine metabolism
plop00450
Selenocompound metabolism
plop00670
One carbon pool by folate
plop01100
Metabolic pathways
plop01230
Biosynthesis of amino acids
Module
plop_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125355295
00270 Cysteine and methionine metabolism
125355295
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125355295
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125355295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125355295
Enzymes [BR:
plop01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
125355295
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125355295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
125355295
NCBI-ProteinID:
XP_048207535
LinkDB
All DBs
Position
7:49225210..49252307
Genome browser
AA seq
399 aa
AA seq
DB search
MQKQDASRHGFQPSFQHFATQAIHVGQEPEQWNSRAVVPPISLSTTFKQGTPGQHSGFEY
SRSGNPTRNCLEKAVAALDGAKYSLAFASGLAAAVTITHLLKAGDQIICMDDVYGGMNRY
FRKVAAEFGLKISFVDCTKTKLLEEAITPETKLVWIETPTNPSLKVVDIEACAHIAHKHG
DIILAVDNSFMSPYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNSEDLHDRLRFLQ
NAIGTVPSPIDCYLCNRGLKTLELRMEKHFKNGMAVARFLEANPRVEKVIYPGLPSHPQH
ELAKRQCTGCPGMISFYIKGTLQHAKVFFKNLKLFTLAESLGGYESLAELPALMTHASVP
KNDRDILGISDTLIRLSVGLEDEKDLLDELDRALKAAHP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacaagacgcgtcccggcacggttttcagcctagcttccaacatttcgccacg
caggccatccacgtgggccaggaaccggagcaatggaactcccgcgcggtggtacccccc
atctcgctgtccaccacgttcaagcaagggacacctggccagcactcgggatttgaatac
agccgttctggaaatcccactagaaattgcttggaaaaagctgtggcagcactggatgga
gctaagtatagtttggcctttgcttctggtctagcagctgctgtgacaattactcatctt
ttaaaagcaggagaccaaattatttgcatggatgatgtgtatggtggtatgaacagatac
ttcaggaaggtggcagctgaatttggattaaagatttcttttgtggactgtaccaaaacc
aaattgctagaagaggcaattacaccagaaaccaagcttgtttggattgaaacccccaca
aaccctagcttgaaggtggttgacattgaagcttgtgcacatattgcccataagcatgga
gacattattttggctgtggataactcttttatgtctccatatttccagcgacctttggct
ctgggagctgatatttgtatgtgttctgcaacaaaatacatgaatggccacagtgatgtt
gtcatgggcttagtgtctgttaattctgaagacctccatgacaggcttcgcttcttgcag
aacgctattggaaccgttccatctcccattgactgttacctctgtaatcgtggtctgaag
acactagaacttcgaatggagaagcatttcaaaaatggaatggctgtggcccggttcctg
gaagctaatccccgggtagaaaaggttatttatcctgggctgccctctcatccgcagcat
gagttggccaagcgtcagtgcacaggttgccctgggatgatcagcttttacattaagggc
actcttcaacatgccaaggttttcttcaagaacttgaagttgtttactctggctgagagc
ttgggaggatatgaaagtctcgctgagcttccggcactcatgacccatgcatcagtgcct
aagaatgacagagatattcttggaattagtgacacactgattcgactctctgtgggctta
gaagatgaaaaagacctgttggacgaactcgatcgagctttgaaggcagcacatccttaa
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