Perognathus longimembris pacificus (Pacific pocket mouse): 125355352
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Entry
125355352 CDS
T08928
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125355352 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125355352 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125355352 (Rorb)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125355352 (Rorb)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125355352 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125355352
NCBI-ProteinID:
XP_048207642
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All DBs
Position
1:complement(93213027..93395619)
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AA seq
470 aa
AA seq
DB search
MCENHLKIKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYNSSISNGLSNLNNETGSTYANGHVIDLPKSEGYYNVDSGQPSPDQSG
LDITGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccacctcaaaattaaagccgatgccactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctccgggattcactacggagtcatcacatgcgaaggt
tgcaagggtttctttaggaggagccagcagaataatgcatcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacagaaaccgttgccaacactgccgactgcagaag
tgtcttgccctaggaatgtcgagagatgctgtgaagtttgggaggatgtccaagaagcaa
cgggacagtctgtacgctgaggtgcagaagcaccagcagcggctgcaggagcagcggcag
cagcagagtggggaggccgaggccctggccagggtgtacaacagcagcatcagcaatggc
ctgagcaacctaaacaatgagaccggcagtacttatgccaatgggcacgtgatcgatctc
cccaagtctgagggttattacaacgtggattctggtcagccatcccctgatcagtcagga
cttgacataactggaatcaaacagatcaagcaagaacctatctatgacctcacctccgta
cccaacttgtttacctatagctctttcaacaacgggcagttagctccaggcataaccatg
acggaaatcgatcgaattgcacagaacatcattaagtcccacctggagacgtgtcagtac
accatggaagagctgcaccagctagcatggcagacccacacttatgaggaaattaaagcg
tatcaaagcaagtccagggaagctttgtggcagcagtgcgccatccagatcactcatgcc
atccagtacgtggtagagtttgcaaagcggatcacaggcttcatggagctctgtcagaat
gaccagattctacttctgaaatcaggttgtttggaagtggttttggtgagaatgtgccgt
gccttcaacccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttctgatgacctagtgaatgaagcatttgactttgcaaagaatctg
tgttccttgcagctgactgaagaggagattgctttgttctcatctgctgttctgatatct
ccagaccgggcttggctgatagaaccgaggaaggtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcatctggatgatgagaccttggcaaagtta
atagccaagataccaaccatcactgcggtttgcaacttgcatggtgagaagctacaggta
tttaagcaatctcatccagacatagtgaatacactgttccctcccctgtacaaggagctc
tttaaccctgactgtgccaccgtgtgcaaatga
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