Perognathus longimembris pacificus (Pacific pocket mouse): 125355377
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Entry
125355377 CDS
T08928
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125355377 (Tmc1)
03037 Cilium and associated proteins [BR:
plop03037
]
125355377 (Tmc1)
Transporters [BR:
plop02000
]
Other transporters
Pores ion channels [TC:
1
]
125355377 (Tmc1)
Cilium and associated proteins [BR:
plop03037
]
Other cilia and associated proteins
Stereociliary proteins
125355377 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Toddler
Motif
Other DBs
NCBI-GeneID:
125355377
NCBI-ProteinID:
XP_048207679
LinkDB
All DBs
Position
1:complement(94844487..94980693)
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AA seq
758 aa
AA seq
DB search
MPPKKVKIQVEEKEEDTEESSSEEEEDKLPRRESLRPKRKRKRDVINEDDPEPEPEDEET
RKAREKERRRRLRRGAEEEEEIDQEELERLKAELDEKRQMIATVKCKPWKMEKKIEVLKE
AKKFVSENEGALGKGQGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFG
SSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGV
LYDFNGLAQYSVLFYGYYNNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGD
DGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAITEERAAQVEENVHLIR
FLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPT
LFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKHVKANITLW
EANMIKAYNASLTGNTTGPPFYVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIG
DFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINI
LRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSF
DCGPFSGKNRMFEVIGETLENDFPSWLAKILRQLSNPGLVIAIILVMVLTIYYLNATAKG
QKAANLDLKKKMKLQALENKMRNKKMAAARAAAAAGGQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaaaagtgaaaatccaagtggaggaaaaagaagaggatactgaggaaagc
tcaagtgaagaagaggaagataaactacctaggagagagagcttgagaccaaagaggaaa
cggaagagagatgttatcaatgaggatgacccagaacctgaaccagaagatgaagaaaca
aggaaagcaagagagaaagaaaggagaagaaggttgagaagaggagcagaggaagaagaa
gaaattgaccaggaagaattggaaagattgaaggcagagttagatgagaagagacaaatg
attgctactgtcaaatgtaaaccttggaaaatggagaagaaaattgaagttctcaaggaa
gcaaaaaaatttgtgagtgaaaacgaaggggctcttgggaaaggacaaggaaaaaagtgg
tttgcatttaagatgatgatggccaagaaatgggccaaatttctccgtgattttgagaac
ttcaaagctgcttgtgttccatgggaaaacaaaatcaaggcaattgaaagtcagtttggc
tcatcagtggcctcctacttcctcttcctgagatggatgtatggagtaaatatggttctt
tttatcctgacattcagcctgatcatgctgcctgagtacctctggggtttgccatatggc
agcttacccaggaaaacagtcccaagagctgaagaagcttcagcggccaactttggcgtg
ttgtatgacttcaacggtctggcacaatattccgtcctcttttatggctattataacaat
aaacgaacgatcggatggctgaacttcaggctgccactgtcttatttcctggtggggatt
atgtgcatcggatacagctttctggttgtcctcaaagcgatgaccaaaaatatcggtgac
gatggaggtggggatgacaatactttcaacttcagctggaaggttttctgtagctgggac
tacctcataggtaatcctgaaacagctgacaacaaatttaattccatcactatgaacttc
aaggaagctataacagaagaaagagcagcccaagtagaagaaaacgtccatctgatcaga
ttcctgagatttcttgctaacttctttgtgtttctgacactgggtgccagtggctacctc
atcttttgggctgtgaagagatcccaggaatttgcacagcaagatcctgacaccctaggg
tggtgggaaaaaaatgaaatgaacatggttatgtctctcctggggatgttctgtccaaca
ttgtttgacttatttgctgaattggaagattatcatcctctcattgctctgaaatggctt
ctgggacgcatttttgctcttcttttaggcaacttgtatgtttttattcttgctctgatg
gatgagataaacaacaagattgaagaagagaagcatgtgaaagccaatatcacactctgg
gaggccaacatgatcaaggcttacaatgcatccctcacagggaataccactgggcccccc
ttttatgtgcatcctgcagatgtgccacgaggaccctgttgggaaacaatggtgggacag
gaatttgtgcggctgactgtgtctgatgttctgactacttatgtcacaatccttattggt
gacttcctccgagcgtgttttgtaaggttttgcaattattgctggtgctgggatttggaa
tatggatatccttcgtacacagaatttgatatcagtggcaacgtccttgctttaatcttc
aatcaaggcatgatctggatgggctccttctttgctcctagcctcccaggcatcaatatc
ctccgactccacacgtccatgtacttccagtgctgggctgtgatgtgctgcaatgttcct
gaagccagggtcttcaaagcttccagatcaaacaatttctacctgggcatgttgctgctc
atccttttcctgtccaccatgcctgtcctctacatgatcgtgtctctcccaccatctttt
gactgtggtcctttcagtggcaaaaacagaatgtttgaagtcatcggtgagactctggag
aatgacttcccaagctggctggcaaaaattttgagacagctctctaatccgggactggtc
attgctatcattctggtgatggtattgaccatctattatctcaatgctactgccaagggc
cagaaggcagcaaatctggacctgaagaagaagatgaaactgcaagctttggagaacaag
atgcgaaacaagaagatggcagctgcacgagcagctgcagctgctggtgggcagtaa
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