Perognathus longimembris pacificus (Pacific pocket mouse): 125355445
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Entry
125355445 CDS
T08928
Symbol
Trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plop01001
]
125355445 (Trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125355445 (Trim33)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125355445 (Trim33)
Protein kinases [BR:
plop01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125355445 (Trim33)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125355445 (Trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
125355445
NCBI-ProteinID:
XP_048207781
LinkDB
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Position
7:complement(69738792..69822601)
Genome browser
AA seq
1231 aa
AA seq
DB search
MAENKGGGEAESGGGGGGSAPGTAGAAGPAAQEAEPPLASVLVEEEEEEGGRAGAEGGAA
GADDDGGAAASSGPAAAAAAPAASGPAAPGGPASASASASASAAGPGPAAGPPASLLDTC
AVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCR
QECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNANAVGFCVECGEWLCKTCIEAH
QRVKFTKDHLIRKKEDVSESVGTSGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHK
EHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVA
IFTLINEINKKGKSLLQQLENVTKERQMKLLQQQSDITGLSRQVKHVMNFTNWAIASGSS
TALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPG
YTPNVVVGQVPPGTNHISKTPGQINLAQLRLQHMQQQVYAQKQQQLQQMRMQQPPAPVPT
TTATAVQQHARQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGIPR
HSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTA
IELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRYITGSHLPPQPTSTMNPSPGPS
ALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSEQVKVKQEPGMEDE
VCSFSGAVKQEKAEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTEPTD
VNESCKQSGLSGLVNGKSPVRSLIHRSARIGGDGSSKDEDPNEDWCAVCQNGGDLLCCEK
CPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQHSKKGKTVQGLSPVDQR
KCERLLLYLYCHELSIEFQEPVPVSIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQVPDDF
VADVRLIFKNCERFNEMMKVVQVYADTQEINLKADSEVAQAGKAVALYFEDKLTEIYSDR
TFAPLPEFEQEEDDGEVTEDSDEDFIQPRRKRLKSDERPVHIKEQTSQKIFRSSLLLKYH
NIEIKPGGVRLLICPPSGTFAWTWGSKRPGRDLCVDVGSEPLSTGLVLAASPISWQWRQN
ASLAVVHFSSSVMLRFKTCVLDCVQASLLLD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggcggcggcgaggctgagagtggtggcgggggcggcggcagcgcg
ccgggaaccgccggggccgcggggcccgcggcgcaggaggcggagccgcctctcgcctcg
gtgctggtggaggaggaggaggaggaaggcggccgggccggcgcggagggcggcgcggcg
ggggccgacgacgacgggggggccgcggcctcctcgggcccggccgctgccgccgccgcc
cctgcggcctcgggccccgcggctcccggcggccccgcgtcggcgtcggcctcggcctcc
gcgtcggctgcgggcccgggccccgcggcggggccgccggcctcgctcctggacacctgc
gcggtgtgccagcagagcctgcagagccggcgcgaggcggagcccaagctgctgccctgc
ctgcactccttctgcctgcgctgcctgcccgagcccgagcgccagctcagcgtgcccatc
ccggggggcagcaacggcgacatccagcaagttggtgtgatacggtgtccagtgtgccgc
caagaatgcagacagatagaccttgtggataattattttgtgaaagacacatccgaagcc
cctagcagttctgatgagaaatcagaacaggtgtgcactagttgtgaagacaatgcaaat
gctgttggcttttgtgtagaatgtggagagtggctatgtaaaacgtgcattgaagcacat
cagagagtcaagttcactaaggatcacttgatcaggaagaaggaagatgtctcagagtct
gttgggacatctggtcagcgtcctgttttctgccctgtacacaaacaagagcagctgaaa
cttttttgtgaaacatgcgatagactgacctgtagagactgccagctattggagcacaaa
gaacataggtatcagtttttggaagaagcatttcaaaatcagaaaggtgcaattgagaat
ttattggctaagcttcttgagaaaaagaattatgttcattttgcagctacccaggtacag
aataggataaaagaagtaaatgaaactaacaaacgagtagaacaggaaattaaagtggcc
attttcacccttatcaatgaaattaataagaaaggaaaatctctcttacagcagctagag
aacgttacgaaagaaaggcagatgaagctcctgcagcagcagagtgacatcacaggcctt
tcccggcaggtgaagcatgtcatgaactttacaaactgggcgattgcgagtggcagcagc
accgctctgctgtacagcaagcggctgattacttttcagttgcgtcatattttgaaagca
aggtgtgaccctgttcctgctgctaatggagcaatccgtttccattgtgatcccaccttc
tgggcaaagaatgtagtcaacttaggtaatctagtaatagagagtaaaccagctcctggt
tacactcctaatgtggtggttgggcaagttcctccaggaacaaaccacattagtaaaacc
cctggacagattaacttagcacagcttcgactccagcacatgcaacagcaagtgtatgca
cagaaacagcagcagttgcagcaaatgaggatgcagcaaccaccagcccctgtgcccacc
acaacagccacggcggtgcaacagcatgccagacaggcagccccacaaatgttacagcag
cagcctccaagattgattagtgtgcaaacaatgcagcgaggcaacatgaactgtggggct
ttccaggcccaccagatgagactggctcagaacgctgccaggattccaggcatcccccga
cacagcggccctcagtactccatgatgcagccgcacctccaaagacaacattcaaaccca
ggccatgctggaccctttcctgtggtatcggtacacaacaccacaattaacccaacaagc
cctaccacagcaactatggcaaatgcaaaccgaggtcctactagcccatctgttacagcc
atagagctaatcccctcagttacaaatccagagaaccttccgtccctgccagatattcct
cctatacagttggaagatgctggatcaagtagtttagataatctactaagtagatacatt
actggcagccatctacccccacagcctacaagcaccatgaacccttccccaggaccctct
gccttatctccaggatcatcaggtttatcaaattctcacactcctgtgaggccccctagt
acctctagtaccggcagtcgaggcagctgtggatcatcagggagaactgctgagaagaca
agtcttagtttcaagtcagagcaagtgaaagtcaagcaggagcctgggatggaggatgaa
gtgtgcagcttctcaggggctgtgaagcaggagaaggcagaggatggcaggaggagtgcc
tgcatgttgagcagccctgagagtagcttgacaccacctctctcaactaacctgcatcta
gagagtgaactggacgcgttagcaagcctagagaatcacgtgaagactgagcccactgat
gtgaatgaaagctgcaaacagtctgggctcagtggcctagtgaatgggaagtctccagtt
cgaagcctcatacacaggtcggcaaggattggaggggatggcagcagcaaagatgaggac
cccaatgaggactggtgtgccgtctgccagaatggaggggatctgttgtgctgtgaaaaa
tgtccaaaggtctttcatctaacttgtcatgttccaacacttcttagctttccaagtggg
gactggatatgcacattttgcagagatattgggaagccagaagttgaatatgattgtgat
aatttacagcacagcaagaaggggaaaaccgtacaggggttgagccctgtggaccaaagg
aaatgtgaacgtcttctgctttacctctattgccatgaattaagtattgaattccaggag
cctgttcctgtgtcgataccaaactactacaagattataaagaaaccaatggatttatcc
accgtgaaaaagaagcttcagaaaaaacattcccaacattaccaagtcccagatgacttt
gtggctgatgttcgtctgatcttcaagaactgtgaaaggtttaatgaaatgatgaaagtt
gttcaagtttatgcagacacacaagagattaatttgaaggctgattcagaagtagctcag
gcagggaaggcagtggcattgtactttgaagataaactcacagagatctactcagacagg
accttcgcacctttgccagagtttgagcaggaggaagatgatggtgaggtaactgaggac
tctgatgaagactttatacagcctcgcagaaaacgcctgaagtcagatgagaggccagta
cacataaaagaacagacttctcagaaaatcttcagaagcagcttattattgaaatatcac
aatattgaaataaaacccggtggggttagattactcatctgtccaccaagtgggacattt
gcctggacttggggctcgaaaagacctggaagagacctgtgtgtagatgtgggaagtgag
ccactctccactggactggtgctggcagcaagccccatctcctggcagtggaggcagaat
gccagcttggctgtggttcatttctcttcatctgtgatgctcagattcaaaacatgtgtt
ctagactgtgtgcaggcttctcttttgttggattaa
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integrated database retrieval system
