Perognathus longimembris pacificus (Pacific pocket mouse): 125355469
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Entry
125355469 CDS
T08928
Symbol
Trim45
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125355469 (Trim45)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125355469 (Trim45)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
Invasin_D3
Ig_GEX2_N
zf-C3HC4_4
ANCHR-like_BBOX
Y_Y_Y
Snapin_Pallidin
Big_1
Motif
Other DBs
NCBI-GeneID:
125355469
NCBI-ProteinID:
XP_048207816
LinkDB
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Position
7:complement(71040608..71050962)
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AA seq
570 aa
AA seq
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MSDPRVPAQPSVLKPPREAAPGKTHCPLCLGLFKTPRLLPCLHTVCTTCLEKLEPFSVGD
ARAGGSDASSEGSGLLDFGPRVGILCPVCDAQVDLPAGGVKALTIDHLALNDVMLESQSG
DGPRLACDLCGDRGVEKRCQTCKANLCHFCCQAHRRQKKTAEHAVVELDEPGRRAGKPAP
CPAHPAEELRLFCELCERPVCGACAAGEHRGHPCEDAGRAVHRHGDALRALLRGARPRLR
ALDEALARVRGRDTALRERVKAVAAEVRACSDGHIAAIQEHRDRLLRQLAALGARRERAL
RLQSAQLEQLRADVSAGVEFAEHLLASGSDLAVLVTKGVVVARLRALSQADCNARPAGHP
HIRFCPQEKAGQCRGYQVYGALDAQEVDPARCILQGEDLHKAREKQTSSFTLLCKDAAGE
SLSRGGDHISVAVVPKDKKDSPVRTMVQDNKDGTYNVSYTPKEPGIYTVWVCVEEQHVQG
SPFTVTVRRRHRTHSGVFHCCTFCSSGGQKAVRCACGGTMPGGYLGCGHGHKGHPGRPHW
SCCGKFAEKSECTHGAGPGAPRNLLRTVAL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacccccgggtgccggcccagccctccgtactcaagcccccccgggaggccgcc
ccgggaaagacccactgccctttgtgcctggggctgttcaagaccccccggctcctgcct
tgcctgcacacggtatgcaccacgtgtctggagaagctggagcccttctcggtcggggac
gcccgcgcggggggctctgacgcgagctccgagggctcgggcctcctggacttcgggccg
cgggtgggcatcctctgccctgtctgtgatgcgcaggtggacctgcccgcgggcggggtc
aaggccctcaccatcgaccacctggccttgaacgatgtcatgctggagagccagagtggg
gacggcccccgcctggcatgcgacctgtgcggcgacaggggggtggagaagaggtgtcag
acctgcaaagccaacctctgccacttctgctgccaggctcataggcggcagaagaagacc
gctgagcacgccgtggtggagctggacgagccggggcggcgcgccgggaagcccgcgcca
tgccccgcgcaccctgcggaggagctgcggctgttctgcgagctgtgcgagcggccggtg
tgcggcgcctgcgcggccggcgagcaccgcggccacccgtgcgaggacgcgggccgggcg
gtgcaccggcacggggacgcgctgcgggcgctgctgcgaggcgcgcggcctcgtctgcgg
gccctggacgaggcgctggctcgggtgcggggccgggacacggcgctgcgcgagcgggtg
aaggccgtggccgccgaggtgcgcgcctgctccgacggccacatcgccgccatccaggag
caccgggaccggctgctgcggcagctggcggcgttgggcgcccggcgcgagcgcgcgctg
cgtctgcagagcgcacagctggagcagctgcgcgccgacgtgagcgcaggcgtggagttt
gccgagcacctgctggccagcggctccgacctggccgtgctggtcaccaagggtgtggtg
gtggcgcggctccgcgcgctgagccaggccgactgcaacgcgcgccccgccgggcacccc
cacatccgcttctgcccccaggagaaggccggccagtgccgcggctaccaggtgtacggg
gccctggacgcccaggaggtggacccggccagatgcatccttcagggagaagatctgcac
aaagctcgggagaagcagacatcctccttcaccctgctttgcaaggatgctgcaggagag
agcctgagcagaggaggagaccacatcagcgtcgcagtagtccccaaagataagaaagac
agtccagtcagaacaatggtccaggataacaaggatgggacgtacaatgtgtcctacacc
cccaaggaacctggcatctatactgtgtgggtttgtgtggaagaacagcacgtgcagggc
tcacccttcactgtgacagtgaggaggcggcaccgcacacactcgggcgtctttcactgc
tgtaccttctgctccagcggcggccagaaagccgtgcgctgtgcctgtgggggcaccatg
ccaggtgggtacctgggctgcggccacggacacaagggccaccccggccgtccccactgg
tcctgctgcgggaagtttgccgagaaatcggagtgcacgcatggggcggggcccggcgcc
ccaaggaacctgctgaggactgtggcattgtga
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