Perognathus longimembris pacificus (Pacific pocket mouse): 125355489
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Entry
125355489 CDS
T08928
Symbol
Sec22b
Name
(RefSeq) vesicle-trafficking protein SEC22b
KO
K08517
vesicle transport protein SEC22
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04130
SNARE interactions in vesicular transport
plop04145
Phagosome
plop05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125355489 (Sec22b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125355489 (Sec22b)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
125355489 (Sec22b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125355489 (Sec22b)
Membrane trafficking [BR:
plop04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
125355489 (Sec22b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Sec20
Motif
Other DBs
NCBI-GeneID:
125355489
NCBI-ProteinID:
XP_048207846
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Position
7:complement(72552334..72570223)
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AA seq
215 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT
FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ
KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY
RQDAKYLNMRSTYAKLAAVAVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgaccatgatcgcccgggtggcggacgggctcccgctggccgcctccatg
caggaggacgagcagtctggccgggacctccagcagtatcagagtcaagctaagcaactc
ttccggaagttgaatgagcagtccccaaccaggtgtaccttggaagcaggcgccatgact
tttcactacatcattgaacagggtgtgtgttacttggttttgtgtgaagctgccttccct
aagaagttggcttttgcttacctggaagatttgcattcagaatttgatgaacagcatgga
aagaaggtgcccacagtgtctagaccttattcctttattgagtttgataccttcattcag
aaaaccaagaagctctacattgacagccgtgctcggagaaacctgggctccatcaacact
gagttgcaagatgtgcagaggatcatggtggccaacattgaagaagtgctgcagcgggga
gaagcactctcagcattggattccaaggcaaacaatttgtccagcctttccaaaaagtac
cggcaggacgcaaagtacttgaacatgcgttccacttacgccaaacttgcagctgtggct
gtgtttttcatcatgttaatagtgtatgtgcggttctggtggttgtga
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