KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125355511
Entry
125355511         CDS       T08928                                 
Symbol
Itga10
Name
(RefSeq) integrin alpha-10 isoform X1
  KO
K06586  integrin alpha 10
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151  PI3K-Akt signaling pathway
plop04510  Focal adhesion
plop04512  ECM-receptor interaction
plop04810  Regulation of actin cytoskeleton
plop04820  Cytoskeleton in muscle cells
plop05165  Human papillomavirus infection
plop05410  Hypertrophic cardiomyopathy
plop05412  Arrhythmogenic right ventricular cardiomyopathy
plop05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    125355511 (Itga10)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125355511 (Itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125355511 (Itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125355511 (Itga10)
   04810 Regulation of actin cytoskeleton
    125355511 (Itga10)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    125355511 (Itga10)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    125355511 (Itga10)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    125355511 (Itga10)
   05414 Dilated cardiomyopathy
    125355511 (Itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:plop04515]
    125355511 (Itga10)
Cell adhesion molecules [BR:plop04515]
 Integrins
  Integrin alpha subunits
   125355511 (Itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_3 FG-GAP_3 ITGAX-like_Ig_3 vWA_SIBA-E
Other DBs
NCBI-GeneID: 125355511
NCBI-ProteinID: XP_048207873
LinkDB
Position
7:complement(73290974..73312392)
AA seq 1167 aa
MELALFLHLFLPLMLLTALSTPFNLDVYHPRLFTGPPEAEFGYSVLQHVGGGQRWMLVSA
PWDGRSGDRTGDVYRCSVEGTHSAPCAKGHLGQHPLGNSSHPAVNMHLGMSLLDTGGDEE
FLACAPLWSRACGTSVFSSGLCARVDASFQPREILAPTAQRCPTYMDVVIVLDGSNSIYP
WSEVQTFLRRLVGRLFIDPEQIQVGLVQYGESPTHEWSLGDFRTKEEVVRAARNLSRREG
RETKTAQAIMVACTEGFSQSRGGRPEAARLLVVVTDGESHDGEDLPAALKACEAGRVTRY
GIAVLGHYLRRQRDPSTFLQEIRAIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGS
HGENESSFGLEMSQIGFSTHRLQDGILFGMVGAYDWGGSVLWLEEGRRLFPPRTALEDEF
PPEFQNHAAYLGYSVSSMLLRGGRRLFLSGAPRFRHRGKVIAFQLKKDGAVRVAQSLQGE
QIGSYFGSELCPLDTDSDGTTDVLLVAAPMFLGPQNKETGRIYVYAVGQQSLLMLQGTLQ
PELSQDARFGFAMGALPDLNQDGFSDVAVGAPLEDGHQGALYLYHGTHRGVRPRPAQRIA
AVSMPQTLSYFGRSVDGRLDLDGDDLVDVAVGAHGAAILLSSRPIVHLAPSLNVTPAAIS
VVQKDCRRRGQDAACLTAVLCFQVTSRTPGRWDRQFDIRFTASLDEWTAGVRAAFDGSGQ
RLSPRRLRVSVGNVTCERLCFHVLDTSDYLRPVALTVTFALDNTTKPGPVLDERSPASIG
KLVPFSKDCGPDNECITDLVLRANMDIRGSRKASFVVRGGQRKVLVSATLENRKENAYYT
SLDLNFSRNLHLASVAPQRDSIIKVECTTRSTHAQLCSVGHPVFQAGAKATFLLEFEFSC
VSLLSQVWVRLTASSSSLERNGTLQDNTVHTSAYIQYEPHLLFSSESTLHRYEVHPYRTL
PMNPGPEFRTTLRVQNLGCYVVRGLVLSALLPAVAHGGNYFLSLSQVVTSNATCTVRNLT
EPPGPLVHPEDLQNTHRLNSSNAQCQVVRCYLGQLTKGTEVSVGLLRLVHNEFFRRAKFK
SLTVVSTFELGTEESSVLKLTEASRWSESLLEVIQTRPVFISLWILIGSVLGGLLLLALL
VSCLWKLGFFARKKVPQEERRKENTEQ
NT seq 3504 nt   +upstreamnt  +downstreamnt
atggagctcgctctcttccttcacctgttcttacccctgatgctcctgacagctctctcc
acaccgtttaacctggatgtgtatcacccacgcctgttcacggggccaccagaggctgaa
tttggatacagtgtcttacaacatgttggaggtggacagcgatggatgctggtgagcgcc
ccctgggacggccgctcaggtgacaggactggggatgtttatcgctgctctgtagagggg
acccacagtgctccgtgtgccaaaggccacttgggtcagcatccactgggaaactcctct
cacccagctgtgaacatgcacctggggatgtctctgctcgacacagggggggacgaggag
ttcctggcctgtgccccgctctggtctcgtgcttgtggcacctctgtcttcagttctgga
ctgtgtgcccgcgtggatgcctccttccagccccgggaaatcctggcgcccactgcccaa
cgctgccctacgtacatggatgttgtcattgtcttggatggctccaacagcatctacccc
tggtctgaagttcagacattcctgcggaggctagtagggagactgtttattgatccagag
cagattcaggtggggctggtgcagtatggggagagccctacgcatgagtggtccctcgga
gattttcggaccaaggaagaagtggtgagagcagcaaggaacctcagtcggcgggagggc
agagaaacgaagactgcccaagcaataatggtggcctgcacagagggattcagccagtcc
cggggtggccggccagaggctgccaggctactggtcgttgtcactgatggagagtctcat
gatggggaagatctcccggcagccctgaaggcctgtgaggcagggagggtgacacgctat
ggaatcgcagtccttggtcattacctccgacggcagcgagaccccagcactttcctgcag
gaaatcagagccatcgccagtgatccggatgagcgtttcttcttcaatgtcactgatgag
gctgcactaacggacattgtggatgcactaggagaccggatttttggccttgagggttcc
catggagaaaatgaaagttcctttgggctggaaatgtctcagattggcttctccactcat
cggctacaggatggaattctttttgggatggtgggagcctatgactgggggggctcagtg
ttatggcttgaagaaggtcgccgccttttccctccacgcacagccctggaagatgagttt
ccccctgaatttcagaaccatgcagcctatttggggtactctgtttcctccatgctgttg
cggggtggacgccggctctttctctcaggggctcctaggtttagacaccgaggaaaagtg
attgccttccagctgaagaaagatggggctgtgagggtcgcccagagcctccagggggag
cagattggctcctactttggcagtgagctttgtccattggatacggatagtgatggaaca
acagatgtcttacttgtggctgcccccatgttcctgggaccccagaacaaggagacagga
cgtatttatgtgtatgctgtgggtcagcagtctttgctgatgctccaaggaacacttcag
ccagaactctcccaggatgctcggtttggttttgccatgggtgctcttcctgatctgaac
caagatggtttctccgacgtggctgtgggagcacctctggaggatgggcaccaaggagcg
ctgtacctctaccatggaactcatcggggagttagacctcgtcccgcccagcggattgct
gctgtctccatgccacagaccctcagctactttggacggagtgtggatggaaggttagat
ctggatggagatgatctggtggacgtggctgtgggtgcccatggggcggccatcttgctc
agctccaggcccattgtccacttggccccatcactcaatgtgactccggccgccatcagt
gtggttcagaaggactgtaggcggcgaggccaggatgcagcttgcctgaccgcagtcctt
tgcttccaagtgacgtctcgcacccctggccgctgggatcgccagttcgacataagattc
accgcatcgttggatgagtggacagcaggggtccgggcggcctttgatggctctggccag
cgactgtcacctcgacggctccgagtcagtgtggggaatgtcacttgtgagcggctctgc
ttccatgtgctggatacctcggattacctccgtcccgtggccttgacagtgacctttgcc
ttggacaataccacaaaaccagggcctgtgctggatgaacgctcaccggcctccatagga
aagctggtccccttctcaaaagattgtggccctgataatgaatgtatcactgacctggtg
cttcgagccaatatggacatcagagggtccaggaaggcttcatttgtggttcgaggtggc
cagcggaaagtactggtgtcagcaactctggagaacaggaaagaaaatgcctactacacc
agcctggatctcaacttctctagaaacctccacctggctagtgttgctcctcagagagac
agcatcataaaagtggagtgcacaacccgttccacccatgcgcagctctgcagcgtgggg
catccagttttccaggctggtgctaaggcgacgtttctgctggagtttgagtttagctgt
gtctcccttctgagtcaggtgtgggtgaggctgacggcaagtagcagtagcctggagaga
aatggaacccttcaagataatacagtgcatacatctgcctacatccagtatgagcctcat
ctcctgttctccagtgagtccactctgcaccgctatgaggttcacccctacaggaccctc
ccaatgaatcctggccctgaattcagaaccactctcagggttcagaaccttggttgttat
gtggtccgtggcctcgtcctctctgccctccttccagctgtagcccatgggggcaattac
ttcctgtctctatcccaagtcgtcacgagcaatgcaacctgcacagtgaggaacctgacg
gagcctccagggccccttgtgcatccagaggaccttcagaacacacacaggctgaattca
agcaacgcgcagtgtcaggtggtgagatgctacctggggcagttgacaaagggaacggag
gtctctgttggactactcaggctggtccacaatgagttcttccggagggccaagttcaag
tctctgaccgtggtgagcaccttcgagctgggaactgaggaaagcagcgtcttgaagctg
accgaagcctcccgctggagtgagagcctcctggaggtgattcagactcgccctgtcttc
atctcgctgtggatcctcattggcagtgtcctgggcgggctgctcctgcttgctctcctt
gtctcctgcctgtggaagcttggcttctttgcccgtaagaaagttccccaggaggaaaga
agaaaagagaacacagagcaatga

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