Perognathus longimembris pacificus (Pacific pocket mouse): 125355517
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Entry
125355517 CDS
T08928
Symbol
Rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125355517 (Rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
125355517 (Rbm8a)
03015 mRNA surveillance pathway
125355517 (Rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125355517 (Rbm8a)
03041 Spliceosome [BR:
plop03041
]
125355517 (Rbm8a)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125355517 (Rbm8a)
Spliceosome [BR:
plop03041
]
Complex C
Other components
EJC/TREX
125355517 (Rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
125355517
NCBI-ProteinID:
XP_048207883
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All DBs
Position
7:complement(73327486..73329431)
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaggccgggggcgaggatttcgccatggatgaggat
ggggacgagagcatccacaaactaaaagaaaaagcgaagaaacggaagggccgcggcttt
ggctcggaagaggggtcccgggcgcgcatgcgggaggattacgacagcgtggaacaggat
ggagacgaacccggaccgcagcgctctgttgaaggctggatactctttgtcactggagtc
catgaagaagccactgaagaagacatccacgacaaattcgccgaatatggggaaataaaa
aatattcacctcaacttggacaggcggacaggatacctaaaggggtatactctagttgag
tatgaaacatacaaagaggcccaggctgccatggagggactcaatggccaagatttgatg
ggacagccaatcagcgtggactggtgttttgttcggggtccacccaagggcaaaaggaga
ggtggccggagacgtagcaggagtccagacaggagacgacgctga
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