Perognathus longimembris pacificus (Pacific pocket mouse): 125355541
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Entry
125355541 CDS
T08928
Symbol
Rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125355541 (Rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125355541 (Rpap2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125355541 (Rpap2)
Protein phosphatases and associated proteins [BR:
plop01009
]
HAD phosphatases
Fcp/Scp phosphatases
125355541 (Rpap2)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125355541 (Rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
125355541
NCBI-ProteinID:
XP_048207919
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All DBs
Position
7:75527610..75600775
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AA seq
642 aa
AA seq
DB search
MADGGVPRCSGLKPGPTRTSRNAAGTKQTRALKQDASERKAELEAAVKKKIEFERKALRI
VEQLLEENITEEFLKECGKFITPAHYSDIVDERSIIKLCGYPLCQKKLGTIPKQKYKIST
KTNKVYDITERKSFCSNFCYKASKIFEAQISNTPVWVREEERHPDFQLLQEGQSGHSGEE
VQFSKALKRSDIDTCHFETQYESSSSSIYSDSNSDNEQDFVSSILPGSRPNARGTRPQLH
KKSIMTNKTGQKASSKHIEHTVVDVTAQLGHCSLDNQEKATCELPLQKVINTPISSNSPS
HEKLNASADSGCKYNMSEITLVGLSKKSAEHFKRKFTKSNQVSRSDCSSAQVCPEVAKTN
LLNVLKETLIEWKTEETLRFLYGQNYASLCLKPSSASLVYEELDEDDINSNPDSHSPYQN
SLDDSLPFRCSDSARKPLPSYKDLKKETETLNLRIKEFYKGRYVLNEETSQSQDSGEHDP
TFPLVDSSAQNQIRKRIVLEKLSKVLPGLLGPLQITVGDVHTELKNLVRTFRLTNRNIIH
KPLEWTLIAIVLLSLEIYKQAFENHKKMYSVLQMNQTYELVWSSGQKCSLAGRLLGLTPI
LGIQKHSPKNMVFTQFITTLLEELHLKNEDLESLTIVFRMSG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtggcgtaccccgttgctcgggcttaaagcccgggcctactcgcacctcc
cgaaacgctgcaggtacaaaacagacacgtgccttgaaacaagatgcttcagaaaggaaa
gcagaactagaagcagctgtgaaaaagaagattgaatttgagagaaaagctctacgtatt
gttgaacaacttttagaagagaatattactgaagagttcctaaaggaatgtggcaagttc
atcactcctgctcactacagtgatattgtggatgaacggtcaatcatcaaactttgtggt
tatcctttgtgtcagaagaaattgggaactataccaaaacagaaatataaaatttctacc
aaaaccaataaagtctatgatattactgaaagaaagtctttttgcagcaatttttgttac
aaagcatctaagatttttgaagcacaaatttccaacactccagtatgggttcgagaagaa
gagaggcatcctgactttcagctgctacaggaaggacaaagtggccattcaggagaagaa
gtacagttcagtaaagccctcaaaagatcagatattgacacttgccattttgaaacacaa
tatgagtctagttcttctagcatttacagtgatagtaacagtgataatgagcaagacttt
gtttcctccattctaccaggaagcagaccaaatgcaaggggtacaaggccacagctgcac
aaaaaaagcataatgacaaataaaactggtcagaaagctagctcaaagcacatagaacac
actgtcgtagatgttactgctcagttaggtcattgtagcttagataatcaagagaaagct
acctgtgaacttcctttacagaaggtaataaatactccaatttcttcaaatagtccttca
catgagaaattaaatgcttcagcagattctggatgtaaatacaatatgtcagaaataaca
cttgtgggcttaagtaagaaaagtgctgagcattttaaaagaaaatttacaaagtcaaac
caagtttctaggtcagactgcagttcagcacaggtgtgccctgaagttgcaaagacaaac
ttacttaatgttctgaaagagactttgattgaatggaagacagaagaaactttgaggttt
ttgtatggccagaattatgcttctctgtgcttaaaaccttcttcagcctctctcgtttat
gaagaacttgatgaagatgacataaattccaatccagatagtcattccccatatcagaac
agcctagatgactcattaccttttagatgctcagattcagccaggaaaccattgccaagt
tataaggatttgaaaaaagaaactgaaaccctgaatttgaggatcaaggagttttataag
ggacgatatgttttgaatgaagaaacttctcaatcacaagactcaggagagcatgatccc
acttttccgctggtagattcaagtgctcagaaccagattagaaaacgcatcgtccttgaa
aaactgagtaaagtattgcctggacttttgggtcctcttcagattacagtaggagatgtt
cacactgaacttaaaaatcttgtccgcacattcagactaacaaatagaaatattatccat
aaacctttggagtggactttaattgctatcgtgttgctgtcacttgaaatatacaagcag
gcttttgaaaatcataagaagatgtactcagttctgcaaatgaatcagacgtatgagctg
gtgtggtctagtggtcagaagtgtagcctggcgggaagacttctgggactgaccccgatt
cttggaattcagaagcattctccaaagaatatggtttttacacagtttataaccaccttg
cttgaagaattacatttgaagaatgaagaccttgagagtttaaccatcgtatttagaatg
agcggttaa
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