Perognathus longimembris pacificus (Pacific pocket mouse): 125355654
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Entry
125355654 CDS
T08928
Symbol
Sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecules
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125355654 (Sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125355654 (Sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125355654 (Sdc3)
Proteoglycans [BR:
plop00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
125355654 (Sdc3)
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
125355654
NCBI-ProteinID:
XP_048208057
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Position
7:complement(18973529..19006199)
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AA seq
443 aa
AA seq
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MKPGPPHRAGAAHGAAAGTGAAAAAASGARGLLLPPLLLLLLAGRAAGAQRWRSENFERP
VDLEGSGDDDSFPDDELDGLYSGSGSGYFEQESGLETAMRFGPDVALATPTTPAVLPTED
VQPVGSPFEELPSEQPSPEPVTSPPVVTEAPEEPSQRATTMAATAAAATTTTEALTMATA
PTTAATTIPSSPAAAPATATAAVVRTTSTRRLLPLPLTTAATAQATTPAVPSPPTTVADL
DTEAPTPRLVSTATSRPRALPRPATTQEPDVIKTITLPLGTTVPGPTEVAQTPTPESFLT
TAREEPEVPVSGGPSGDFELPEEETTQPDAANEVVAVEVPAAKPSPPSGTLPKGARPGPG
LLDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSY
TLEEPKQASVTYQKPDKQEEFYA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgcgccggggccgcccacggggccgccgcggggaccggg
gccgccgccgccgccgcctccggggcccgcgggctgctcctgccgccgctgctgctgctg
ctgctcgcggggcgcgccgcgggggctcagcgctggcgcagtgagaacttcgagcggccc
gtggacctcgaaggctccggggatgatgactcctttcctgatgatgaactggacggcctc
tattcagggtcaggctcgggctacttcgagcaggagtcgggccttgagacggccatgcgg
tttggccctgacgtggccctggccacgcccaccacacctgcggtgctgcccacagaggac
gtccagccagtgggctccccatttgaagagctcccctctgagcaacccagtccagagcca
gtcaccagtcccccagtggtgacggaggccccagaagagcccagccagagagccaccacc
atggccgccacggccgctgccgccaccaccaccacggaggccctgaccatggccacggcc
cccaccacagcagccaccaccatccccagctcccccgcagccgccccggctacagccacc
gctgcggttgtgaggaccaccagcacgcggaggctgctgcctctcccactgaccacggcc
gccacagcccaggccaccaccccagcggtgccctctccgcccaccacggtggccgacttg
gacacagaggccccgacacccaggctggtcagcacagctacctcccggcccagagctctt
ccgcggccagccaccacccaggagcctgatgtaatcaagaccataaccctgcccctgggg
actaccgtccctggtcccacggaggtggctcagaccccgactcccgagtccttcctcacc
acggcccgggaggagccagaggtgccggtgagcggggggcccagcggggacttcgagctg
cctgaggaggagaccacacagcctgacgcagccaacgaggtggtggccgtggaggtcccc
gcggccaagccgtcacctccatctgggacgctgcccaagggcgcccgccctggcccgggc
cttctagacaatgccatcgactcgggcagctccgctgctcagctccctcagaagagcatt
ctggagcggaaggaggtcctcgtagctgtgattgtgggcggtgtggtgggtgccctgttc
gccgccttcttggtcacgctgctcatctaccgcatgaagaagaaggatgagggcagctac
acgctggaggagcccaagcaggcgagcgtcacgtaccagaagccagacaagcaggaggag
ttctatgcctag
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