Perognathus longimembris pacificus (Pacific pocket mouse): 125355750
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Entry
125355750 CDS
T08928
Symbol
Abca4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125355750 (Abca4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125355750 (Abca4)
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125355750 (Abca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
125355750
NCBI-ProteinID:
XP_048208118
LinkDB
All DBs
Position
7:complement(76627763..76754737)
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AA seq
2256 aa
AA seq
DB search
MEEEWLVVFVQGIRFVVELVWPLSLFLILIWLRNANPLYSQHQYRRVGTQTGPSFTCHAN
LKRHFGKFISEGQQGFTGERVLSYLCNTILARVYRDFREVLMDAPESQHLGQVWTELRTL
ARLMDTLRTHPESFAGRGIQIRDILKDEETLTLFLVRNIGLSDSVASLLVNSQVRMEQFA
HGVPDLALKDIACSEVLLERFIIFSQRRGAQTVRDTLCPLSQGILQWMEDTLYANVDFFK
LFRVLPTILDRSSQGINLRSWGKTLSDISPRIQEFIHRPSVQDLLWVTRPLLQKSSPETV
TQLLDILPDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIYSYDKRTTSFCNA
LIQSLESNPLTKLAWRAVKPLLMGKILFTPDSPAVRKILKNANSTFEELERLRKLIRSWG
EVGPQIWYFFDKSTQITMIRETLGHPTVKDFVNKQLAGEGVTAEAILNFLYKGPSESPSD
DMTSFDWRAIFNITDRSLRLINQYLECLVLDKFESYDDEIQLTQRALSLLEQNRFWAGVV
FLDMHPWTSSLPRHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDLRYIWGGFAYLQ
DMVEQGITRSQARAEAPVGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVK
GIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSISIFLLTIFIMHGRILHYSNPFV
LFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTAELKK
AVSLLSPVAFGFGTEYLVRFEEQGLGLQWDNIGNSPMEGDEFSFLLSMQMMLLDAALYGI
LAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHPGM
NDSFFERELPGLVPGVCVKNLTKVFESCSRPAVDQLNITFYESQITAFLGHNGAGKTTTL
SILTGLLPPTSGTVLIGGKDIETSLDEVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGK
SWEEAQLETEGMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVILDEPTSGVD
PYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGT
GFYLTLVRKMKNTQNQRSACEGACSCASKGFSRCPARVDEITEEQVLDGDINELMDLVRH
HVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGVSDTPLEEIFL
KVTEDSDPGSLFAGGTQQKRDTTSLRYPYLGPNKKGRQPPHTCSSGQAGPPESQTSPPEQ
GDPSPPLNTGTQLVFQHVQALLIKRFHHTIRSHKDFLAQIVLPATFVFLALMLSVIVPPF
GEFPALTLHPWMYGKQYTFFSMDEPGSERLAELADVLLNRPGFGNRCLKEEWLPEYPCGN
STPWKTLSVSPNLTHLFQKQKWTTANPSPSCKCSTREKLTMLPECPEGAGGLPPPQRTQP
STEILQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPALPITGEALV
SFLRDLGHIMNVSGGPITREASKEMPDFLKYLETQDNIKVWFNNKGWHALVSFLNVAHNA
ILRASLPKGRNPEEHGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASF
VLYLIQERVNKAKHLQFVSGVSPTTYWLTNFLWDIINYAVSAGLVVGIFIGFQKKAYTSP
QNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFILELFE
NNRTLLRFNTMLRKLLIIFPHFCLGRGLIDLALSQAVTEVYARFGEEHISNPFQWSLIGK
NLVAMAVEGVVYLLLTLLIQHHFFLTRWIAKPTKEPITDEDDDVAEERQRITSGGNTSDI
LRLNELTKVYSGSTSPAVDRLCVGIHPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDAT
VAGKSILTDISNVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQS
LGLSLYADRLAGMYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRLLWNTIVSII
REGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKDD
LLPDLNPVEQFFQGNFPGSVQRERHYNMLQYQVSSSSLARIFQLLISHKDSLLIEEYSVT
QTTLDQVFVNFAKQQTETYDLRLHPRAAGASQQAKV
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaatggctagtggtctttgtgcaggggattcgctttgtggtggaactggtg
tggcctttatccttgtttctcatcttgatctggctaaggaatgccaacccactctacagc
caacaccaatacagacgcgtgggaacccagacagggccgtccttcacctgccatgccaac
cttaagcggcactttggaaagtttatctctgaaggtcaacaagggtttactggggagcgg
gttttatcctacctgtgtaacactattttagcaagggtgtatcgagattttcgagaagtc
ctcatggatgcgcccgagagccagcatcttggccaggtttggacagagctccgcacctta
gccaggctcatggacaccctgaggactcatcctgagagctttgcaggaagaggaatacaa
attcgagatattttaaaagatgaagagacactgacgttgtttcttgtgaggaacattggt
ttgtccgactcagttgccagccttctggtcaattcccaagtccgcatggaacagtttgct
cacggagtcccagacctggcactgaaagacattgcctgcagtgaggtcctcttggagcgc
ttcatcatcttcagccagcgtcgtggggcacagactgtgcgtgacaccctgtgtcccctc
tcccagggcatcctacagtggatggaagacactctgtatgccaacgtggacttcttcaaa
ctcttccgtgtgcttcccaccatcctagacagaagttctcaaggtatcaatctgagatcc
tgggggaaaacattatctgatatttcacctagaattcaagagtttatccatcggccaagt
gttcaagacttgctgtgggtgacaagacctctcctgcagaaaagcagtcctgagactgtc
acccagctcctggacatcctgcctgacctcctgtgcgggtacccagagggaggaggctct
cgtgtgttctccttcaactggtatgaagacaataactacaaagccttcctggggattgac
tccacgcggaaagaccccatctattcctacgacaaaagaacaacatccttttgtaacgca
ttgatccagagcctggagtcaaaccctttaaccaaattggcttggagggcagtaaagcct
ttgcttatgggaaaaatccttttcactccggactcccctgcagtgcgaaagatactgaag
aatgccaattcaacttttgaagaactggagcgcctcaggaagctcatcagatcctgggga
gaagtagggccccagatctggtacttctttgataagagcacccagataaccatgatcaga
gaaaccctggggcacccaacagtaaaggactttgtgaataaacagcttgcaggagaaggt
gtcactgctgaagctattctaaacttcctgtataagggtcccagcgagagcccctctgat
gacatgaccagctttgattggagagctatatttaacatcactgaccgttccctacgcctg
attaaccaatacctggagtgcctggtactagataagtttgaaagctacgatgatgaaatt
cagctcacccagcgagccttgtctctgctagaacaaaacaggttctgggctggtgtggtg
ttcctggacatgcatccctggactagctccctgccacgccacgtgaagtataagatccgc
atggacatagatgtggtagagaaaacaaataagatcaaagacaggtactgggattctggc
ccccgagcagaccctgtggaagatctccggtatatctggggtggctttgcatatctgcag
gacatggttgagcaagggatcaccaggagtcaggccagggcagaagctcctgttggagtt
tatctccagcagatgccttatccctgctttgtcgatgactcttttatgatcatcctgaac
cgctgtttccccatcttcatggtgctggcatggatctactctgtctccatgactgtcaag
ggcattgtcttggaaaaggagttgaggctgaaggagacattgaaaaatcagggcgtctcg
aatgcagtgatttggtgtacctggttcctggacagcttctccatcatgtcgataagcatc
ttccttctgaccatcttcatcatgcatggaagaatcttacattacagcaatccatttgtc
ctcttcctgttcctgctggcgttctccacggccaccatcatgcaatgcttcctgcttagc
accttcttctccaaggccagcctggcagccgcctgcagcggagtcatctacttcacgctc
tacctgccacacattttgtgcttcgcctggcaggaccggatgacggctgagctgaagaag
gcggtgagcttgctgtctcctgtggcatttgggtttggcacggagtatctggtccgcttt
gaagagcaaggccttgggctgcagtgggacaacatcggaaacagtcccatggaaggagat
gagttcagtttcctgctgtccatgcagatgatgctcctcgatgccgccctttatggtata
ctggcctggtacctggaccaggtgtttccaggagactatggaactccacttccctggtac
ttccttctacaagagtcttactggcttggtggtgaagggtgttcaacaagagaagaaaga
gccctggaaaagactgaacccctaacagaggaaatggaggacccagaacatcctggaatg
aatgactccttctttgaacgggagcttccagggctggttcctggagtatgtgtgaagaat
ctgaccaaggtttttgagtcctgtagccggccagccgtggaccagctcaacatcaccttc
tatgagagccagatcaccgcgttcctcggacacaatggcgcagggaaaaccaccaccttg
tctatcctgacaggtctgttgccgccaacatcggggactgtgctcattgggggaaaggac
attgaaaccagcctggatgaggtccgccagagcctgggcatgtgcccacagcacaacatc
ctgttccaccacctcacagtggcagagcacatcctgttttatgcccagctgaaggggaag
tcctgggaggaggcccagctggagacggaaggcatgttggaggacacaggcctccaccac
aagaggaatgaagaggcccaggatctctcaggcggcatgcagaggaagctgtcggtggcc
atcgccttcgtgggcgactctaaggtggtgattctggatgagcccacctctggggtggac
ccctactctagacgctccatctgggacctactcctgaagtatcgctcaggcagaaccatc
atcatgtccacgcaccacatggacgaggcagacctcctgggggaccgcatcgccatcatt
tcccagggaaggctctactgctcgggcaccccgctcttcctgaagaactgctttggcaca
ggcttttatttgaccttagttcgcaagatgaaaaacacccagaatcaaagaagtgcttgt
gagggggcctgcagctgtgcgtctaagggtttctccaggtgtccagctcgagtggatgag
atcactgaagaacaagtcttagatggggatataaatgagctgatggacttggttcggcac
cacgttccagaagccaagctggtagaatgcattggtcaagaacttatcttccttcttcca
aataagaatttcaagcagagagcatatgccagccttttccgagagctggaggagacactg
gctgacttggggctcagcagttttggagtttctgacacacccctcgaagagatttttctg
aaggtcacagaggactctgatccaggatctctatttgctggtggcactcaacagaaaagg
gataccaccagtctccgatacccctatttgggtcccaacaagaaggggagacagcctccc
cacacctgctcctctggacaggctggtccccccgagagccagacttctcctccagagcaa
ggggaccccagtcccccactcaacacgggcacccagctggtcttccagcacgtgcaggct
ctgctgatcaagcgattccaccacaccatccgcagccacaaggacttcctggcccagatt
gtgctccctgccacatttgtgtttctggctctgatgctttccgtcatcgtgcctcctttc
ggtgaatttcctgctttgacccttcacccctggatgtatgggaagcagtacacattcttc
agcatggatgagccaggcagtgagcgccttgcagaactggcagatgtcctcctcaacagg
ccaggcttcggcaaccgctgcttgaaggaagaatggctcccggaatacccgtgcggcaac
tccaccccctggaagacgctgtctgtgtctccaaacctcacccacctgttccagaagcag
aaatggacgacagccaacccctccccctcctgcaaatgcagcaccagggagaagctcacc
atgctgcccgagtgccccgagggagccgggggcctccctcccccccagaggacacagccc
agcactgaaatcctacaagacctgactaacaggaacatttctgattacttggtaaagaca
taccccgctctcataagaagcagcttaaagagcaaattctgggtcaatgaacaaaggtac
ggaggaatatccattggaggaaagctcccagccctccccattactggagaagcacttgtc
agttttttaagggaccttggccatatcatgaatgtgagcgggggtcctatcaccagagag
gcctctaaagaaatgcccgatttccttaaatatcttgaaactcaagacaacattaaggtg
tggtttaacaacaaaggttggcatgccctagtcagctttctgaacgtggcccacaatgcc
atccttcgtgccagcctgcccaaaggcagaaacccagaggagcatgggatcacggtcatt
agccagcccctgaacttgaccaaggagcaactctcagagatcactgtgctgaccacttct
gtggatgctgtggttgccatctgtgtgattttcgccatgtccttcgtcccagccagcttt
gtcctctacttgatccaggagagagtgaataaggctaagcacctgcagtttgtcagtgga
gtgagccccaccacctactggctgaccaacttcttgtgggacattataaattatgctgtg
agcgctgggctggtggtggggatcttcatcgggtttcagaagaaagcctacacgtctccg
cagaaccttcctgcccttgttgcgctactcatgctgtatggatgggcggtcatccccatg
atgtacccagcatccttcctgttcgatgtccccagcacagcttatgtggctttgtcttgt
gctaatctgttcatcggcatcaacagcagtgccatcaccttcatcctggaattatttgag
aataaccggacactgctccggttcaacaccatgctgaggaagctgctcattatcttcccc
cacttctgcctcggccggggcctcattgacctggcactgagccaggctgtgacagaggtc
tatgctcggtttggcgaggagcacatctccaatccattccagtggagcctgattgggaag
aacctggttgccatggccgtggaaggggtggtgtacctcctcctgaccctcctcatccag
caccacttcttcctcacccgctggattgctaagcccaccaaggagcccattactgatgaa
gatgatgatgtggccgaagagagacaacgaattactagcggggggaatacaagtgacatt
ttaagattaaatgaactaaccaaggtgtattcagggtccaccagtccagcagtagacagg
ctgtgtgttgggatccaccctggagaatgctttggtctcctgggagtgaatggtgctgga
aagaccaccacattcaagatgctcactggggacaccacagtgacctccggtgatgccaca
gtagctggtaaaagtatcttaaccgatatttccaacgtccatcaaagtatgggctactgt
cctcagtttgatgcaattgatgacctactcacaggccgagaacacctttacctttatgcc
cggctccggggtgtaccagcagaagaaattgagaaggtggcgaactggagtattcagagc
ctggggctgtctctctatgcagaccgcctggccggcatgtacagtgggggcaataaacgc
aaactctccacagccatcgcgctcatcggatgcccgccactggtgctgctggacgagccc
accacagggatggacccccaggctcgccgcctgctgtggaacaccatcgtgagcatcatc
agagaagggagggctgtggtcctcacttcccacagcatggaagaatgtgaggcgctgtgt
accaggctggccatcatggtgaagggcacctttcagtgtctgggcacgattcagcacctc
aagtacaagtttggagatggctacattgtcaccatgaaaatcaaatcccccaaggatgac
ttgcttcctgacctgaatcctgtggagcagttttttcaaggcaactttccaggcagcgtg
cagagggagaggcactacaacatgctgcagtaccaggtctcctcgtcctccctggctagg
atcttccagctgctcatttcccacaaggacagtctgctcatcgaagagtactcagtcacg
cagaccacgctggaccaggtcttcgtgaactttgctaaacagcagactgaaacatacgac
ctccgcttgcaccctcgagctgcaggagcaagccagcaagccaaggtttga
DBGET
integrated database retrieval system
