Perognathus longimembris pacificus (Pacific pocket mouse): 125355909
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Entry
125355909 CDS
T08928
Symbol
Sox11
Name
(RefSeq) transcription factor SOX-11 isoform X1
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125355909 (Sox11)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125355909 (Sox11)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125355909
NCBI-ProteinID:
XP_048208135
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Position
8:complement(75528946..75530313)
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AA seq
455 aa
AA seq
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MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSASQSPEKSAAGGGAGAGGAKTSKSSGKKCGKLKAPPAAAAAAAARAG
AGAGAGAGAGKAAQPGDFGAAGDDGAPGGPRAGGAGGGGGGAGKPTVKCVFLDEDDDEDE
DDDELQLRIKQEADDEDEEPPHPPLLQPPGPQQAPPLLRRYNVAKVPASPTLSSSAESPE
GASLYEEVRAGAPSGSGAGSRLYYSFKNITKQQPPALAQPALPPASARSGSVSASSGAGA
GGGDDGDDLMFDLSLNFSQSAHGAGEQPLGAGAAAAAAAAAGNLSLSLVDKDLDSFSEGS
LGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggcggagagcttggaagcggagagcaacctgccccgggaggcgctggac
acggaagagggcgaattcatggcgtgcagcccggtggccctggacgagagcgacccggac
tggtgcaagacggcgtccggccacatcaagcggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgccggaagatcatggagcagtccccggacatgcacaacgccgagatctcc
aagaggctgggcaagcggtggaaaatgctcaaggacagcgagaagatcccgttcatccgg
gaggcggagcggctgcggctgaagcacatggccgactaccccgactacaagtaccggccc
cggaaaaagcccaagatggacccctcggctaagcccagcgccagccagagcccggagaag
agcgcggcgggcggcggcgcgggcgcgggcggcgccaagacctccaagagctccggcaag
aagtgcgggaagctcaaggccccccccgccgccgccgccgccgccgccgccagggccggg
gccggggccggggccggggccggggcgggcaaggcggcccagcccggggacttcggggcc
gcgggggacgacggcgccccgggcggcccgcgcgcgggcggcgcgggcggcggcggcggc
ggcgcggggaagccgacggtcaagtgcgtgttcctggacgaggacgacgacgaggacgag
gacgacgacgagctgcagctgcggatcaagcaggaggcggacgacgaggacgaggagccg
ccgcacccgccgctcctgcagcccccgggcccgcagcaggccccgccgctgctgagacgc
tacaacgtggccaaggtgccggccagccccacgctgagcagctcggccgagtcccccgag
ggcgccagcctgtacgaggaggtgcgggcgggcgcgccctcgggctccggggccggcagc
cgcctctactacagcttcaagaacatcaccaagcagcagccgccggcgctggcgcagccc
gcgctcccgcccgcgtccgcgcgctccggctccgtctccgcctcctcgggcgccggcgcg
ggcggcggcgacgacggcgacgacctgatgttcgacctgagcttgaatttctcccaaagc
gcgcacggcgccggcgagcagccgctcggggcgggcgcggcggcggcggcggcggcggcg
gccgggaacctgtccctgtcgctggtcgacaaagatttggattcgttcagcgagggcagc
ctgggctcccacttcgagttccccgattactgcacgcccgagctgagcgagatgatcgcg
ggggactggctggaggcgaacttctccgacctggtgttcacgtattga
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