Perognathus longimembris pacificus (Pacific pocket mouse): 125355941
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Entry
125355941 CDS
T08928
Symbol
Lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125355941 (Lingo2)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125355941 (Lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_9
LRR_LRWD1
Ig_6
C2-set_3
Ig_C17orf99
Sp38
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
125355941
NCBI-ProteinID:
XP_048208157
LinkDB
All DBs
Position
1:complement(125762136..125884643)
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AA seq
606 aa
AA seq
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MLHTAVSCWQPFLGLAVVFIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDM
MPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLTRLQ
ELHIVGAQLRTIEPHSFQGLRYLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL
LVDEGQTVQLECNADGDPQPMISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGM
YVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacagccgtatcatgctggcagccattcctgggtctggctgtggtgttcatc
ttcatgggatccaccatcggctgccctgctcgctgcgagtgctctgcccagaacaagtct
gttagctgccacagaagaaggctaattgccatcccagagggcattcccatcgagaccaaa
atcttggacctcagcaaaaacaggttgaaaagtgtcaaccctgaagaattcatctcatac
cctctcctggaggagatagacctgagtgacaatatcattgccaatgtggagccaggggcg
ttcaacaatctctttaatctgcggtcccttcgcctgaaaggcaatcgcctgaagttggtc
cctttaggagtattcacggggctgtccaacctcaccaaactggacattagtgaaaataag
attgtgattttactggattacatgttccaggatctgcataacctgaagtctcttgaagtg
ggagacaatgatttggtttatatctcacaccgggctttcagcgggctacttagcttggaa
cagctcaccctggagaaatgcaacctcacggcagtccccacggaagccctctcccacctc
cgcagcctcatcagcctacacctgaagcatctcaacatcaacaatatgcccgtgtatgcc
ttcaaaagattgttccatctgaaaaacctagagattgactattggcctttactggatatg
atgcctgccaatagcctctacggtctcaacctcacgtctctttccataactaacaccaac
ctgtccactgtccctttcctggcctttaaacatctggtatacctgacccaccttaacctc
tcctacaatcccatcagtaccattgaagcaggcatgttctctgacctgacccgccttcag
gagctgcatatcgtgggggcccagctccgtaccattgagcctcattccttccaagggctc
cgttatctgcgtgtgctcaatgtgtctcagaacctactggaaactttggaagagaacgtc
ttctcctccccgagggctttggaggtcctgagcattaataacaacccactggcttgcgac
tgccgtctcctctggatcctgcagcgacagcccaccctgcagtttggtggccagcagccc
atgtgcgctggaccagacaccatccgggagagatccttcaaggatttccacagcactgcc
ctttctttttatttcacctgcaaaaaacccaaaatccgtgagaagaagttgcagcacctt
ctcgtggatgaagggcagactgtgcagctagaatgcaatgcagatggagatccacagccc
atgatttcctgggtgacaccccgacggcgttttatcaccaccaagtccaacggaagggcc
accgttttgggtgatggcaccttagaaatccgctttgcccaggatcaagacagtgggatg
tatgtttgcatcgctagcaacgctgctggaaatgacaccttcacggcctccttaactgtg
aaaggattcacttcagaccgcttcctttacgcaaataggacccccatgtacatgaccgac
tccaatgacaccatttccaatggcaccaatgccaatactttctccctggaccttaaaaca
atactggtatcgacagccatgggctgtttcacattcctgggagtggttttattttgtttt
ctcctcctttttgtgtggagccgagggaaaggcaagcacaaaaacagcattgaccttgag
tatgtaccccgaaaaaacaatggtgctgttgtggaaggggaggtagccggacccaggagg
ttcaacatgaaaatgatttga
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