Perognathus longimembris pacificus (Pacific pocket mouse): 125356039
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Entry
125356039 CDS
T08928
Symbol
Sema4c
Name
(RefSeq) semaphorin-4C
KO
K06521
semaphorin 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125356039 (Sema4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plop04090
]
125356039 (Sema4c)
CD molecules [BR:
plop04090
]
Proteins
125356039 (Sema4c)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
Ig_SEMA-3_4_7A
PSI
Ig_3
I-set
Ig_2
DUF7269
Motif
Other DBs
NCBI-GeneID:
125356039
NCBI-ProteinID:
XP_048208248
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All DBs
Position
8:1261293..1267770
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AA seq
832 aa
AA seq
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MAPHWAAWLLAAGLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
RPGLLYVGAREALFAFSVEALELQGVISWEAPAEKKTECIQKGKSNRTECFNFIRFLQPY
NASHLYACGTYAFQPKCAYIDVLTFTLGSGEFEDGKGKCPYDPAKGHTGLLVDGELYSAT
LNNFLGTEPVILRNMGPHHPMKTEYLAFWLNEPHFVASAYVPESVGSAVGDDDKIYFFFS
ERAVEYDCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAPGWQLYFNQLRGV
HTLRGASWHNTTFFGVFRARWGDVDLSAVCEYQLKDIQRVFEGPYKEYHEQAQKWGRYTD
PVPSPRPGSCINNWHRSHGYASSLELPDNTLNFIKKHPLMEEQVGPRWGRPLLVKKGTNF
TQLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQVFDQEPVESLVLSQS
KKLLFAGSRSQLAQLPLADCGKYRSCVDCVLARDPSCAWNVNASRCVAVGSHSGSLLMQH
VSGLDTSGICNLRTRKVRLTPKNITVVAGTDLVLPCRLSSNLARARWTFGGRDLPVEQPG
SFLYDAQLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN
LGLVWLAVVALGALCLVLLLLVLSLRRRLREELEKGSKAAERTLVYPLELPKEPASPPFR
PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPAGIPGQPLPSPTRLHLGGG
RSSNANGYVRLQLGGEDRAGLGNPLPEIADELRRKLQQRQPLPDSNPEESSV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggccccacactgggcggcgtggctgctggcggcggggctttggggcctgggcatcggg
gctgaggtgtggtggaacctcgtgccccggaagacagtatcttctggggagctggccacc
gttgtgcggcgattctcccaaaccggcatccaagacttcctgacgctgaccctgacggag
cgccccgggcttctgtacgtgggggcccgggaggcgctgttcgccttcagcgtggaggcc
ttggagctgcaaggagtgatctcctgggaggccccagccgagaagaagactgaatgtatc
cagaaagggaagagcaaccggacggagtgcttcaacttcatccgcttcctgcagccgtac
aacgcctctcacctctacgcgtgcggcacctacgccttccagcccaagtgtgcttacatc
gacgtgctcaccttcaccttggggagcggagagtttgaggacgggaaggggaagtgtccc
tacgaccccgccaagggccacacgggcctcctcgtggacggcgagctgtactcggctacg
ctcaacaacttcctgggcacggagcccgtcatcctgcggaacatggggccccaccacccc
atgaagaccgagtacctggccttctggctgaacgaaccccactttgtcgcctccgcctac
gtccccgagagcgtggggagcgccgtgggagacgacgacaagatctacttcttcttcagc
gagcgggcggtggagtacgactgctacgcggagcaggtggtggcccgcgtggcccgcgtc
tgcaagggcgacatgggcggcgcgcggaccctgcagaagaagtggaccaccttcttaaag
gcgcgcctggcctgctctgcgcccggctggcagctctacttcaaccagctgcgcggcgtg
cacaccctgcggggcgcctcctggcacaacaccaccttcttcggggttttccgggcgcgc
tggggtgacgtggacctgtcggctgtctgtgagtaccagctgaaagacatccagcgggtg
ttcgagggcccctacaaggagtaccacgagcaggcccagaagtggggccgctataccgac
cccgtccccagccctcggcccggctcgtgcatcaacaactggcaccgcagccacggctac
gccagctccctggagctgccggacaacaccctcaacttcatcaagaaacacccgctgatg
gaggagcaggtggggccccgctggggccgccccctgctcgtgaagaagggcaccaacttc
acccagctggtggctgaccgggtcacggggctcgatggggccacctacacggtgctgttc
atcggcacaggagacggctggctgctgaaggccgtgagcctggggccctgggtgcacctg
attgaggagctgcaggtgtttgaccaggagcccgtggaaagcttggtgttgtcgcagagc
aagaagctgctctttgcgggctctcgctcgcagctggcacagctgcccctggccgactgc
gggaagtaccgctcctgcgtggactgcgtcctggcgcgggacccctcctgtgcctggaat
gtcaacgccagccgctgcgtggccgtgggcagccactctggatccctgctgatgcagcac
gtgtcgggcctggacacctcgggcatctgcaacttgcgcactaggaaagtcaggctaaca
cccaaaaacatcacggtggtagccggcacagacttggtgctgccctgccggctctcctcc
aacctggcccgcgcccgctggacctttgggggccgagacctgcccgtggaacagcctggc
tccttcctgtacgacgcccagctgcaggcgctcgtggtgatggctgcccagccgcggcac
gccggggcctaccactgcttctcggaggagcagggggcccggctggccgcagagggctac
ctggtggccgtcgtcgcgggcccctccgtgaccctggaggcccgggctcccctggagaac
ctggggctggtgtggctggctgtggtggccctgggggccctgtgcctggtgctgctgctg
ctcgtcctgtcgctgcgccggcggctgcgggaggagctggagaagggctccaaggccgcc
gagaggaccctggtgtaccccctggagctgcccaaggagcccgccagcccccccttccgg
cccggccctgaaacggacgagaagctttgggatccggttggctactactactcggacggc
tccctcaagatcgtgcccggacacgcccggtgccagccggggggcgggcccccctctccg
cccgccggcatccccggccagcccctgccttccccgacgcggctgcacctgggcggcggg
cgcagctccaacgccaacggctacgtgcggctgcagctgggcggggaggaccgcgcgggg
ctggggaaccccctgcccgagatcgcggacgaactgaggcgcaagctgcagcagcgccag
ccgctgccggactccaaccccgaggagtcctcggtatga
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