Perognathus longimembris pacificus (Pacific pocket mouse): 125356098
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Entry
125356098 CDS
T08928
Symbol
Aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125356098 (Aff3)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125356098 (Aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
125356098
NCBI-ProteinID:
XP_048208352
LinkDB
All DBs
Position
8:complement(3943308..4421920)
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AA seq
1223 aa
AA seq
DB search
MDSFDLALLQEWDLESLCVYEPDRNALRRKERERRNQETQQDGGTFNSSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVTQTPANKIDEHFVADSRAQS
QPPSVCNTTSSTPAAVPVQQSKRGNMGWQKAGHPSSDGQQRAAPQGSLRTLLGDGVGRQQ
PRAKQVCNVEMGLQTQERPSAMAAKHNSSGHCVQNFPPSLASKPSLVQQKPTAYVRPMDG
QDQAPDESPKLKSSTEPAVHCASYRGGPATKPESARTKTKLSKFSIPKQGEETRSGESNS
CVEEIIREMTWLPPLSAVQAPGKVEPSKFPFPNKDSQLVSSGHNNPKKGDAEPESPDNGT
SNTSMLEDDLKLSSDEEESEQQAAQRTALHTLSDSTVVQQTNCRGSVLSSKGSSSGSSSS
SSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKWLNKVNPHKP
PVPVQTEGRGGGGGGPEGAPYYPPVKDEAPDGGKPPPDAGPAGPRADKEGKAACKEEQRP
RTASKAPGSKGAKQKSPPAAVVAVAAACAAPPGGPVESAPAPARRSAAAAAGKKPARRAE
RTPAGDGAAGPRPEEPAGPDALPEPAKAKAGGAPRTAHRKEPRPPAAAAAPAAPAPGEKR
RTRGLGRIAPKSKEFIETESSSSSSSSSSDSDLESEQDDFPLAKAPAAPAADPRPKEAPG
PRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSDEVRALWVKIDLTLLSRI
PEHLPQDPGVPSAPAAKDADSAAPGHALDTQAEKALPKPRRKRKCDNEDDYREMKKAQGE
KESSLRLSASASNTLSVNHCTMNINSVAIPINKNEKMLRSPISPLSDVSKHKYSGEDFPS
SGRPHGNGVFTTASSNKKPKTDSHAGDLTKAAHSSENGLHSKSRPQTEPWSPGSSGHRDC
KRQKLVFDDMPRSADYFMQEAKRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPM
ESKSPYTMYSETVELIRYAMRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHA
VKYSKALIDYFKNSSKASQAPSPWGASGKSTGTPSPMSPNPSPPSSVGSQGSLSGGSALS
PTTIVSIPHRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHS
SMEHLVQYSQQGLHWLRSSTHLA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtgtgtctat
gaaccagataggaatgcattacggaggaaagaacgagagagaagaaaccaagaaacacaa
caggatggtggcacctttaattctagttactctctcttcagtgagccctacaagactaac
aagggggatgaactctccaaccggatccagaatactttaggcaattatgacgaaatgaaa
gactttttaacggatagatccaatcagagccatcttgttggtgtccccaaaccgggggtt
actcagactcctgccaacaagattgatgagcattttgtggcagattcaagagctcaaagc
cagcccccatctgtgtgtaataccacatcttccacaccagcagctgtccctgtgcaacaa
agtaagagaggcaacatgggctggcagaaggctgggcacccatcatctgatggccaacag
agagcagcaccacagggctctcttagaaccttgcttggagatggtgttggcagacagcaa
ccgcgggccaaacaagtgtgtaatgtggagatggggcttcagacccaggaaaggccatct
gcaatggcagctaagcacaacagcagtggacactgcgttcagaactttcctccgtcattg
gcttccaaacctagtctggtccagcagaagccaactgcatatgtacgaccgatggatggc
caagaccaggctcctgatgagtcccctaagctgaagtcctctacagaacctgccgtacac
tgtgcatcctacagggggggcccagccaccaagccagagtcggccagaacgaagaccaag
ctttccaagttcagcatccccaagcagggggaggagactagatctggagaaagcaacagc
tgtgttgaagaaataattcgggagatgacctggcttccaccactttctgctgttcaagca
cctggcaaagtagagccaagcaaatttccatttccaaataaggactcgcagcttgtatct
tctggacacaataatccaaagaaaggtgacgctgagccagagagtcccgacaatggcaca
tcgaatacatcaatgctggaagatgaccttaagctaagtagtgatgaagaagagagtgaa
cagcaggcagcccagagaacagctctccacactctatctgacagcaccgtggtccagcag
accaactgcagaggctccgtgctgtccagcaagggcagcagcagcggcagcagcagcagc
agcagcagctcgtccagcgactcagaaagcagctctggatctgactcggagaccgagagc
agctccagcgagagcgagggcagcaagcccccccacttctccagccccgaggcggaaccg
gcctcctccaacaagtggcagctggacaaatggctcaacaaggtcaacccgcacaagccc
cccgtccccgtccagactgagggccgcggcggcggcggcggcgggccggagggcgcgccc
tactacccgccggtgaaggacgaggcgcccgacggcgggaagccgcccccggacgcgggc
ccggccggcccgcgcgcggacaaggagggcaaggccgcctgcaaggaggagcagcggccg
cggaccgccagcaaggccccgggcagcaagggcgccaagcagaagtcgccgcccgcggcc
gtggtggcggtggccgcggcctgcgccgcgccgcccggcgggcccgtggagagcgcgccc
gcgcccgcccgccggtctgcggcggcggcggccggcaagaagcccgcccggcgcgccgag
cggacccccgcgggcgacggcgccgccggcccccggcccgaggagcccgcgggccccgac
gccctccccgagcccgccaaggccaaggccggcggcgccccccggaccgcgcaccgcaag
gagccgcgcccgcccgccgccgccgccgcgcccgccgcgcccgcccccggcgagaagcgg
cgcacgcggggcctgggccgcatcgcgcccaagtccaaggagttcatcgagaccgagtcc
tcgtcctcctcgtcctcctcctcctccgactcggacctggagtccgagcaggacgacttc
cccctcgccaaggcgcccgccgcgcccgccgccgacccccggcccaaggaggcgcccggc
ccccgcgcccccgtgggctccatcaacgccaggaccaccagcgacatcgccaaggagctg
gaggagcagttctacacgctcgtccccttcggccgcaacgagctgctctcgcccctgaag
gacagcgacgaggtcagggccctctgggtcaaaattgacctgacgctcctgtccaggatc
cccgagcacctgccccaggacccgggggtcccgagcgcccccgcggccaaggacgcggac
agcgcggcccccggccacgcactagacactcaggcagaaaaggctttgcccaaacccagg
aggaaacgcaagtgtgacaatgaagacgactacagggagatgaagaaggcccagggagag
aaagaaagctctttgagactgtctgcatctgccagtaacaccttgtctgtgaaccactgc
actatgaacatcaatagtgtggcaataccaataaataaaaatgagaagatgcttcggtca
cccatctcacccctctctgacgtatccaaacacaaatactccggtgaggacttcccttcg
tccggccggcctcacggtaacggtgtcttcaccactgcctcttccaacaagaagcccaag
actgacagccatgccggagacctcacgaaagctgctcacagttccgagaatggtctccac
agtaagtcacggccacagacggagccgtggtctccaggctccagtggtcaccgggactgc
aagaggcagaagctggtcttcgatgacatgccacgaagtgcagattattttatgcaggaa
gctaaacggatgaagcacaaggcggatgcaatggtggagaagtttggaaaggcgttgaac
tacgctgaagccgccctgtcgtttattgagtgtggtaatgcgatggaacaaggccccatg
gaatccaagtctccttacaccatgtactcagaaacagtggagctcatcaggtatgctatg
agactaaaaactcactcaggccccaacgccactccagaggacaagcagctggctgcattg
tgttaccgatgtctggctctcctgtactggcggatgtttcggctcaaaagggaccacgct
gtgaagtattcaaaagcacttattgactattttaagaattcatcgaaagcctcccaggcc
ccgtctccttggggtgccagtgggaagagcactggaaccccatcccccatgtctcccaac
ccctctccccccagctccgtggggtctcagggcagcctctccggcggcagcgccctgtcc
ccgacgaccatcgttagcatcccccaccgcatccaccagatggccgccaaccacgtcagc
atcaccaacagcatcctccacagctacgactactgggagatggccgacaacctggccaag
gagaaccgagagttcttcaacgacctggacctgctgatgggcccggtcaccctgcacagc
agcatggagcacctggtgcagtactcgcagcagggcctgcactggctccggagcagcacc
cacctggcctag
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