Perognathus longimembris pacificus (Pacific pocket mouse): 125356199
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Entry
125356199 CDS
T08928
Symbol
Rmnd5a
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5A
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125356199 (Rmnd5a)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125356199 (Rmnd5a)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
125356199 (Rmnd5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-Nse
Rtf2
Motif
Other DBs
NCBI-GeneID:
125356199
NCBI-ProteinID:
XP_048208492
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Position
8:complement(12875900..12923735)
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AA seq
391 aa
AA seq
DB search
MDQCVTVERELEKVLHKFSGYGQLCERGLEELIDYTGGLKHEILQSHGQDAELSGTLSLV
LTQCCKRIKDTVQKLASDHKDIHSSVSRVGKAIDKNFDSDISSVGIDGCWQADSQRLLNE
VMVEHFFRQGMLDVAEELCQESGLSVDPSQKEPFVELNRILEALKVRVLRPALEWAVSNR
EMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNFQPFALNHQKDIQVLMGSLVY
LRQGIENSPYVHLLDSNQWADICDIFTRDACALLGLSVESPLSVSFSAGCVALPALINIK
AVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPMKLVCGHIISR
DALNKMFNGSKLKCPYCPMEQSPGDAKQIFF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgcgtgacggtggagcgcgagctggagaaggtgctgcacaagttctcgggc
tacgggcagctgtgcgagcgcggcctggaggagctcatcgactacaccggaggcctcaag
cacgagatcctgcagagccacggccaagatgctgaattatcagggacactttcacttgtt
ttgactcagtgctgtaaaagaataaaggataccgttcagaaattggcctcagaccacaaa
gacatccacagcagcgtgtctcgggttggaaaagccattgataagaattttgattctgac
attagcagtgtaggaatagatggctgttggcaggcagacagccaaaggcttctcaatgag
gtgatggtggaacacttctttcgacaaggcatgctggatgtggccgaggagctctgccag
gaatctggtctttctgtagacccaagtcaaaaagaaccatttgtggagttaaatcgaata
ttagaagcattaaaagtcagagttctgagacctgctctagagtgggcagtttccaacaga
gaaatgctcattgcccaaaacagctccttggaatttaaactacaccgactatatttcatt
agcttgttaatgggcggaaccacaaatcagcgagaagcattgcagtatgctaagaatttt
cagccatttgccctaaatcatcaaaaagacattcaggtattaatgggaagcctggtgtac
ctgaggcagggaattgagaactcaccctacgttcacctgcttgactcgaaccagtgggca
gacatctgtgacatcttcacgcgggatgcctgcgccctcctggggctctcggtggaatct
cctctcagtgtcagtttttcagcaggttgtgtggcactgccagctttaattaacatcaaa
gctgtgattgaacagaggcagtgcactggcgtgtggaaccagaaagatgaattacctatt
gaagtggaccttggtaaaaagtgctggtatcactctatatttgcctgtcccattcttcgt
cagcaaacaacagataacaatcctcccatgaaattggtgtgtggtcatattatatcaaga
gatgccctgaataaaatgttcaatggtagcaagttaaaatgtccatattgcccaatggaa
caaagtccgggagatgccaagcagatatttttctga
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