Perognathus longimembris pacificus (Pacific pocket mouse): 125356203
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Entry
125356203 CDS
T08928
Symbol
Rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125356203 (Rnf103)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125356203 (Rnf103)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125356203 (Rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
Thioredoxin_6
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
125356203
NCBI-ProteinID:
XP_048208500
LinkDB
All DBs
Position
8:12974547..12994578
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AA seq
684 aa
AA seq
DB search
MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS
GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL
VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCKRRGWIRSTLIMSVPQT
STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWVKIYLF
ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGVYNMPSYILRTPEGIYRYG
NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL
GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF
LSTYLGHGLLIDYFEKKRRRSNNDEVNVNNLEWLSSLWDWYTSYLFHPIASFQNFPIESD
WDEDPDLFLERLAFPDLWLHPLIPTDYIKSLPMWRFKCLGVQSEEEMSEGSQDTENDSDS
ENTDTVSREKEVFEAKQSLAHNPPGRASHCDAEACSCANKYCQTSPYERKGRSYGSYSTN
GDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPV
CRWPSYKKKQPYAQHQPLSNDVPS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagctgtttttcttgctcctctacttcctggtcctcttcgtcctggccagg
tttttcgaggccattgtgtggtacgagaccggcatcttcgccacccagctggtggacccc
gtggcgctgagcttcaagaagctgaagaccatcctggagtgccgcgggctgggctactcg
gggctgcccgagaagaaggatgtgcgggagctggtggaaaagtcaggtgacttgatggaa
ggtgagctctattctgccctcaaagaagaggaggcttctgaatccgtttctagcaccaat
ttcagtggtgaaatgcacttctatgagcttgtagaagacacaaaagatggcatctggctt
gtgcaggtcatagcaaatgaccgaagtccgttggtgggtaaaattcactgggagaaaatg
gtgaaaaaggtgtcaaggtttggaatacgtacaggcactttcaactgctccagtgatccc
aggtactgcaagagaagaggctggattagatccactctcattatgtctgttccacagaca
agtacatctaaagggaaagtcatgcttaaagaatatagtggacgaaagattgaagtagag
cacatatttaaatggataactgcccatgcagcttctcgaatcaaaaccatttataatgct
gaacatttgaaagaagaatggaataaaagtgatcagtattgggtaaaaatctacctattt
gcaaaccttgaccaaccaccagctttcttctctgcactaagtataaaatttaccggaaga
gttgaatttatatttgttaatgtggaaaactgggacaacaagagttatatgacagatatt
ggtgtatataatatgccatcttacatacttagaactcctgaaggaatttacagatatgga
aaccacacaggcgaatttatatcccttcaggcaatggattcatttttgcgctcattacaa
cctgaagtaaatgatctgtttgttttaagtttggttctagttaatcttatggcttggatg
gacttatttattacacaaggagctaccatcaagcgattcgtggttcttataagcacttta
gggacatataattctctgttaattatttcctggctacctgtattggggtttttacagctc
ccttacttagatagcttttatgaatatagcttaaagttgttgagatactctaatacaacc
acattggcttcatgggtaagggcagactggatgttttactcttcacacccagccctgttt
ctcagtacatatcttggacatggtttactaatcgattactttgaaaagaagagacggcga
agcaacaatgatgaagtcaacgtcaataacttagaatggttgtcaagtttgtgggactgg
tacaccagctacctcttccaccccattgcttcctttcagaactttcccatagaatctgat
tgggatgaagaccctgacttattcttggagcgattagctttccctgacctttggcttcac
cctctgataccaactgattacataaaaagcttaccaatgtggcgatttaaatgtcttgga
gtccagtctgaagaggaaatgtcggagggttctcaagacactgaaaatgattcagacagt
gagaacacagacactgttagcagagagaaagaagtatttgaagctaaacaaagcctagct
cacaatcctccaggaagagcaagtcactgtgatgctgaggcttgctcatgtgccaataaa
tattgtcagaccagcccatatgaaaggaaggggaggtcatatggatcctacagcactaac
ggagacatggaacccgattggttaacttggcctgctgatatgttgcactgtactgaatgt
gttgtttgcctagagaattttgaaaatggatgcttgctgatggggttgccttgtggtcat
gtattccatcagaattgcattgtgatgtggttggctgggggccgacactgttgccctgtt
tgtcggtggccttcttataagaaaaagcagccatatgcacaacaccagcctttgtcaaat
gatgtcccatcttaa
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