Perognathus longimembris pacificus (Pacific pocket mouse): 125356250
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Entry
125356250 CDS
T08928
Symbol
Vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125356250 (Vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356250 (Vps54)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125356250 (Vps54)
Membrane trafficking [BR:
plop04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
125356250 (Vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
DCP1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
125356250
NCBI-ProteinID:
XP_048208563
LinkDB
All DBs
Position
8:complement(19583641..19660698)
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AA seq
975 aa
AA seq
DB search
MASSHSSSPVPQGSSDVFFKKEVDSAKHIRHVQSLPDVCPKEPTGDSNSLCVAPSLVTDQ
HRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTAYQ
QEISQREKIHERCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNS
VLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHEL
QDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHVLRLALARNNCVKVYNKLKLMATVHQTQP
TVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGLQLCELEKLIDKMMIAEFSTY
SHNDLNRPLEDDCQVLEEERLVSLVFGLLKQRKLNFLETYGEEMIIAAKNIIKQCVINKV
SQIEDIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLD
KNQRARELEEISQQKNAAKDNSLDTEVAYLTHEGMFISDAFSEGELAPSVVDTTSQRNAS
PNSEPCSSDSVSEPECTTDSSSSKEQTSSSTPGGVDIMTSEDMKLTDLELGKLANNIQEL
LYSASDTCHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFIADTEQVCGRKSTSLLG
ALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDAISDGKISLPEKKTGA
TEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNS
RSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYNMLRH
FDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIF
DLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGL
KDLDLNMAEIWEQKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagtgatgtcttctttaaa
aaagaggtagattcagcaaaacatattcgacatgtgcagtcactgccagatgtgtgtccc
aaggagcccacaggtgattcaaatagtttatgtgttgccccatctctagttacagatcaa
catagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcctaga
ttagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggacacc
gaagtcataccttcattctacctccctcagatcagcaaggaacattttacagcatatcaa
caggaaatctctcagagagagaagattcatgaaagatgcaagaatatttgtcctcctaaa
gatacctttgacaggactcttttacatactcacgataaatccaggacagatctggagcaa
gtacctaagatttttatgaaaccagattttgccttggatgattccctgacttttaattca
gttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagcttcc
tcaaagttacttcaagaaaagctgagccattacctggatattgtggaagtaaacattgct
catcagatctctctgcgttcagaagcattttttcatgcaatgacctctcaacatgaattg
caggactacctcaagaaaacctcccaggctgtaaaaatgcttcgtgataaaattgcacag
attgataaagtaatgtgtgaaggatcactacatgttttaagactggcgcttgccagaaat
aattgtgttaaagtgtacaataaactgaagttaatggccactgtacaccaaactcagcct
acagtgcaggtgttattatctacttccgaatttgttggagcattggacttaatagcaaca
acgcaagaggttctacagcaggaattacagggcattcatagcttccggcatttgggatta
caactttgtgaattagagaaattgatagataaaatgatgattgcagaattttctacttat
tctcacaatgacttaaataggccactggaagacgactgtcaagttttagaagaggaaaga
ctagtatctcttgtatttggacttttaaaacaaagaaaacttaattttttagaaacctat
ggtgaagaaatgattattgccgcaaagaatataattaaacagtgtgtgattaataaagtt
tcacaaatagaagatatagacacagatgttgttgtaaagcttgcagatcagatgagaatg
ttgaatttccctcagtggtttgacttattaaaggatattttctctaagtttacaattttc
ctgcagagagttaaggccacattgaatataattcacagtgttgttctctcagttcttgac
aaaaaccaaagggctagagagctggaggagatttcccagcagaagaatgctgcaaaagac
aattcattggacacagaggtggcttatttaacccatgaaggcatgtttataagtgatgca
ttcagtgagggtgaattagcaccttcagtagttgacactacctctcaaagaaatgcgtct
ccaaatagtgagccctgcagcagtgattcagtatctgaacctgaatgtactactgattct
tcatccagcaaagaacagacatcgtcatctactccaggaggtgtggatattatgaccagt
gaagacatgaaattaactgacttagagctaggaaagctggcaaataatatccaagagtta
ttgtacagtgcctcagatacatgtcatgatcgagctgtcaaatttcttatgtcaagagca
aaggatggttttcttgagaagctaaattccatggaattcataactctctctagattaatg
gaaacattcattgcagacactgaacaggtctgtggaagaaaaagcacatcattacttgga
gcacttcagagccaagctaataaatttgtaaataggtttcatgaagaaagaaaaaccaaa
ctcagccttctcttagacaatgagcgctggaagcaagctgatgttcctgcagaatttcaa
gatcttgttgatgctatatcagatggaaagatttctttacccgaaaaaaaaacaggagct
acagaagaaaggaagccagctgaagttctcattgtagagggacaacagtatgctgttgtt
ggaactgtattgctgttaataagaattatccttgaatattgccaatgtgtggataacatc
ccatctgttactactgacatgcttactcgtctgtcagatttgttaaagtacttcaactca
agaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaaaccata
actacaaaaaatttggctctttcttcgaggtgtttgcagttaattgtgcactacattcct
gtgatccgggctcattttgaagctcgcctaccacctaagcaatataacatgcttaggcat
tttgatcacatcactaaggattaccatgaccacatagctgaaatatcagccaagctagta
gcgataatggatagtttatttgacaagctgttatcaaagtatgaggtgaaagctcctgtt
ccttctgcctgcttcaggaatatttgtaagcaaatggcaaaaatgcatgaagctatattt
gatcttcttccagaagaacaaacacagatgttatttttaagaattaacgcaagttacaaa
ctccacttgaaaaagcaattatctcacttaaatgtgataaatgatggaggacctcaaaat
gggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaaggcctt
aaagatttggacctaaatatggctgagatctgggaacagaagagatga
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