Perognathus longimembris pacificus (Pacific pocket mouse): 125356303
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Entry
125356303 CDS
T08928
Symbol
Tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125356303 (Tia1)
03041 Spliceosome [BR:
plop03041
]
125356303 (Tia1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125356303 (Tia1)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125356303 (Tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
DbpA
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
125356303
NCBI-ProteinID:
XP_048208638
LinkDB
All DBs
Position
8:complement(24918352..24957425)
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AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKNTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQGFNQTPSSAPWMGPNYGV
QPPQGQNGSMLPSQPAGYRVAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatatgttggtaacctttccagagatgtgacagaa
gctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagctggaaatgatccatattgttttgtggagtttcatgagcatcgacatgcagct
gcagcactagctgctatgaacgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagacacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtgtttgttggtgatctcagtccagaaattacaactgaa
gatataaaagcagcttttgcaccgtttggaagaatatcagatgcccgagtggttaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaataaatgggatgcc
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaaccagaaaacctccagctccaaagaatacatatgagtcaaatacaaaacagcta
tcatatgatgaggttgtcagtcaatctagtccaaacaactgtactgtgtactgtggaggt
gttacttctggattaacagaacagctaatgcgtcagactttctcaccatttggacaaata
atggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtttctgttaatggtactaccattgaaggtcatgttgtgaaa
tgctattggggcaaagaaactcttgatatgattaatcctgtgcaacagcagaatcaaatt
ggatatccacaagcttatggccagtggggacagtggtatggaaatgcacaacagattggc
cagtacatgcctaatggttggcaagtacctgcatatggaatgtatggccagccatggaac
cagcaaggctttaatcagacaccatcttctgcaccttggatgggaccaaattatggagtg
cagccacctcaaggacagaatggcagcatgttgcctagtcagcctgcgggataccgagta
gccgggtatgaaacccagtga
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