Perognathus longimembris pacificus (Pacific pocket mouse): 125356316
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Entry
125356316 CDS
T08928
Symbol
Dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356316 (Dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125356316 (Dysf)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Others
Ferlins
125356316 (Dysf)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125356316 (Dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
dsRBD2
Motif
Other DBs
NCBI-GeneID:
125356316
NCBI-ProteinID:
XP_048208666
LinkDB
All DBs
Position
8:25837029..26037529
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AA seq
2148 aa
AA seq
DB search
MLCCLLVRASNLPSVKKDRSDPVASLTFRGVKKRTKVIKNSVNPVWNEGFEWDLKGIPLD
QSSELHVVVKDHETMGRNRFLGEAKVPLREVLSTPSLSASFNAPLLDTKQHPTGASLVLQ
VSYTPLPGAVPLFPPSVPLEPSPTLPDMDLVAGGGQSRAETWSLLSDSTVDTRYSGKKWP
APTDTAGEEDTEDQGLTGDEAEPFLDQSGAPGPGAPTTPKKPPSHPPPYHPGSKRKRSVP
TSRKLLSDKPQDFQIRVQVIEGRQLPGVNIKPVVKVTAAGQTKRTRIQKGNSPLFNETLF
FNMFDSPVELFDEPIFITVVDSRSLRTDALIGEFRMDVGTIYREPRHTYFRKWLLLSDPD
DFSAGARGYLKASLCVLGPGDEAPLDRKDPSEDKEDIEGNLLRPTGVALRGAHFCLKLFR
AEDLPQMDDAVMDNVKQIFGFDSNKKNLVDPFVEVSFAGRMLCSKILEKTANPQWNQNIT
LPAMFPSMCEKMRIRIMDWDRLTHNDVVSTTYLGMSKISAPGGEIEEEPAGVAKPQQATD
LDDNLGFLPTFGPCYVNLYGSPREFTGFPDPYAELNIGKGEGVAYRGRLLLSLETKLVEH
SEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSASMLQDVDDAIQFEVSIGNYGNKFDTT
CLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVVLSSYWEDISHRIETRNQLLRIADRLEA
GLEQIHLASKAQCSTEDTDSLVAQLMDELIADCSQPLGNVQEIPSATHLDQYLFRLRTRH
LSQITEAALALKLGHSELPAILEQAEDWLLRLRALAEEPQNSLPDIVIWMLQGDKRVAYQ
RVPAHEIIFSRRGANYCGRNCGKLQTIFLKYPMEAVPGARMPVQIRVKLWFGLSVDEKEF
NQFAEGKLSVFAETYENQTKLALVGNWGTTGLTYPKFSDVTGKIKLPKDSFRPSTGWAWA
GDWFVCPEKTLLHDADAGHLSFVEEVFENQTRLPGGQWIYMSDNYTDVNGEKVLPKDDIE
CPVGWKWEDEEWSTDLNRAVDEQGWEYSITIPPDRKPRHWVPAEKMYYTHRRRRWVRLRR
RDLSQMEALKRHRQAEAEGEGWEYASLFGWKFHLEYRKTDAFRRRRWRRRMEPLEKTGPA
AVFALEGALGGVVDDRSEDSMSVSTLSFGVNRPTISCIFDYGNRYHLRCYMYQARDLPAM
DKDSFSDPYAIVSFLHQSQKTVVVKNTLNPTWDQTLIFYEIEIFGEPASIAEQPPSIVVE
LYDHDTYGADEFMGRCICQPSLERIPRLAWFPLMRGSQTAGELLASFELIQREKPAIHHI
PGFEVQDTSRILDELCAPAFFLQGLLQTSDDTDLPYPPPQREANIYMVPQNIKPALQRTA
IEILAWGLRNMKSYQLASISSPSLVVECGGQTVQSCVIRNLRKNPNFDICTLFMEVMLPR
EELYCPPIVVKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSAQSPSPHGGPDDVSLLSPG
EDVLIDIDDKEPLIPIQLADGLSSLAPTNMASSPTSPHEEEFIDWWSKFFASIGESEKCG
SYLEKDFDTLKVYDTQLENVEAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFKGLFKIY
PLPEDPAIPMPPRQFHQLAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKISIGKKSV
SDQDNYIPCTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVIDLENRLLS
KFGARCGLPQTYCVSGPNQWRDQLRPSQLLHLFCQQNRVKAPVYRTDRVTFQDKEYTIEE
IDAGRIPNPHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWIDLFPK
ALGRPGPPFNITPRKARRFFLRCIVWNTKDVILDDLSLTGEKMSDIYVKGWMVGFEEHKQ
KTDVHYRSLGGEGNFNWRFVFPFDYLPAEQVCSIAKKDAFWSLDKTESKIPARVVFQIWD
NDKFSFDDFLGSLQLDLNRMPKPAKTAEKCSLDQLDDTFHPEWFVSLFEQKTVKGWWPCV
AEEGEKRILAGKLEMTLEIVAESEHDERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPY
KTMKFILWRRFRCAIIFFIILFILLLFLGIFVYAFPNYAAMKLVKPFS
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgcctgctggtgagggccagcaacctccctagtgtgaagaaggaccgcagc
gaccctgtcgccagcctgactttccgaggggtaaagaagagaaccaaagtcatcaagaac
agtgtgaaccccgtgtggaatgagggctttgagtgggacctcaagggcattcccttggac
cagagctctgagcttcatgtggtggtcaaggatcatgagacaatgggaaggaacaggttc
ctgggggaagccaaggtcccactccgggaagtcctgtccacccccagtctatctgccagt
ttcaatgctcccctgctggataccaagcagcatcccactggggcctcgctggtcctgcag
gtgtcctacacaccactccccggagctgtgcccctgtttccaccctctgttcctctggag
ccctctcccacattgcctgacatggacttggtggctggtgggggacagagccgggccgag
acttggtccttgctcagtgacagcaccgtggacacgagatactctggaaagaagtggcca
gctcccacggacacagcaggagaggaagacactgaggaccaggggctcacgggagatgag
gcagagccgttcctggatcagagtggagctccaggccctggagctcctaccacccccaag
aaaccaccttcccatcctcccccctaccaccctggaagcaaaagaaagagaagtgtgccc
acatccagaaagctgctgtcagacaagcctcaggacttccagatcagagtccaggtgatc
gaggggcgccagctgccaggggtgaacatcaagcctgtagtcaaggtcacggctgctgga
cagaccaaaaggactcggattcaaaagggaaacagccctctcttcaacgagactcttttc
ttcaacatgtttgactcgcccgtggagctgttcgatgagcccatctttatcacggtggtg
gactcccgttccctcaggacagatgctctcatcggggagttccggatggacgtgggcacc
atttacagagagccccggcacacctatttcaggaaatggctgctgctttctgaccctgat
gatttctcggctggggccagaggctacttgaaagctagtctgtgtgtgctggggcctggc
gatgaagctcccctggatagaaaagacccctctgaagacaaggaggacatcgaaggcaac
cttctcagaccaacaggcgtggcccttcgaggagcccacttctgcctgaagctcttcagg
gctgaggatttaccgcagatggatgacgctgtgatggacaacgtgaaacagatctttggc
tttgacagtaacaagaagaacttggtggacccctttgtggaggtcagcttcgcggggaga
atgctctgcagcaagatcttggagaagacagccaacccccagtggaaccagaacatcacg
ctacccgccatgtttccctccatgtgtgagaaaatgaggattcgcatcatggactgggac
cgcctcactcacaatgacgttgtgtccaccacctacctgggtatgtcaaaaatctctgct
cctggaggagaaatagaagaggagcctgcaggtgtggccaagcctcaacaagccacagac
ctggacgacaatctaggcttcctccccacctttggtccctgctatgtgaacctgtacggc
agtccccgggagttcacgggcttcccagacccctatgcagagctcaacataggcaagggg
gaaggtgtggcctaccgaggccggcttctgctgtccttggagaccaagctggtggagcac
agtgagcagaaggtggaggacctccctgcggatgacatcctccgggtggagaagtacctc
cggaggcgcaaatactccctctttgcggccttctactcggcctccatgctgcaggacgtg
gacgatgccatccagtttgaggtcagcattgggaactacggcaacaagttcgacacaacc
tgtctgccgctggcctccaccacccagtacagccgggcagtctttgatgggtgccactac
tactacttaccctggggcaatgtgaagccggtcgtggtgctgtcctcctactgggaggac
attagccataggattgagactcggaaccagctgctcaggattgctgaccggttggaagct
ggcttggagcagatccacctggcctcgaaggcacagtgttccacggaggacacagactct
ctggtggctcagctgatggatgagctcattgcagactgcagccagcccctgggtaacgtc
caggagataccttctgctactcacctggaccagtacctgttccggctacgtacccgtcat
ctgagccagatcactgaggctgccctggctttgaagctcggccacagtgagctccctgct
attctagagcaggctgaggactggctcctaaggctccgtgccctggcagaggagccccag
aacagcctgccggacattgtcatctggatgctgcagggagacaagcgtgtggcctaccag
cgggtacccgcgcatgaaatcatcttctcccggcgtggtgccaactattgtggcaggaat
tgtgggaagctgcagacaatctttctaaagtatccaatggaggcagtgcctggagcccgg
atgccagtgcagatacgagtcaagctctggtttgggctctctgtggatgagaaggagttc
aaccagtttgctgaggggaagctctccgtctttgctgaaacttatgagaaccagaccaag
ctggccttggttgggaactggggcacaacgggccttacataccccaagttttctgatgtt
acgggcaagatcaagctacccaaggacagcttccgtccctcaactggatgggcctgggca
ggagattggttcgtgtgtccggagaagaccctgcttcatgatgctgatgctggtcatctg
agctttgtggaggaggtgtttgagaaccagacccgactccctggaggccagtggatctac
atgagtgataactacactgatgttaatggggagaaggtgcttcccaaggatgacattgag
tgcccagtgggctggaagtgggaagatgaagaatggtccacagacctcaatcgggctgtc
gatgagcaaggctgggagtacagcatcaccattcccccagaccggaagccaaggcactgg
gtccccgctgagaagatgtactatactcaccgacgaaggcgctgggtccgcctgcgcagg
agggacctcagccagatggaagcactgaagagacacaggcaggcagaggcagagggcgag
ggctgggagtatgcctctctctttggctggaagtttcacctggagtaccgcaagactgac
gcctttcgccgccgccgttggcgccgtcgcatggagcccctggagaagacagggcctgct
gccgtgtttgccctcgagggggccctgggtggtgtggtggatgacaggagtgaagattcc
atgtctgtgtctaccctgagcttcggtgtaaacagacccacaatctcctgcatctttgat
tatgggaaccgctaccacttacgctgctacatgtaccaggcccgggacctgcctgcgatg
gacaaggactcattctctgatccctacgcaatcgtctccttcttacaccagagccagaag
acagtggtggtgaagaatactctgaaccccacctgggaccagacactgattttctatgag
attgaaatttttggcgagccggccagcattgcagagcagccacccagcattgtagtagaa
ctctacgaccatgacacctatggtgcagatgagtttatgggccgctgcatctgtcagcca
agtctggaacggataccccggctggcctggttcccactgatgaggggcagccagacggcg
ggagagctgctggcatcttttgagcttatccagagagaaaagccggccatccaccatatt
cctggttttgaggtacaagacacatcaaggatcctggatgagctgtgtgctcctgccttc
ttcctccagggccttctgcagacgtcagatgacacagacctgccctacccgccacctcag
agggaggccaacatctacatggttccccagaacatcaagccagctctccagcgcactgcc
attgagatcctggcatggggcttacggaatatgaagagctaccagctggccagtatttca
tcccccagccttgtagtggagtgtgggggccagacagttcagtcctgtgtcatcaggaac
ctccggaagaaccccaactttgacatctgtactctcttcatggaagtgatgctgcccagg
gaggaactctactgtccccccatcgtggtcaaggtcatcgataaccgccagtttggccgc
cggcctgtggtgggccagtgtaccatccgctccctggagagcttcctgtgtgacccctat
tcagcccagagtccatcccctcatggtggcccagatgacgtgagtttactcagcccggga
gaagatgtgctcattgacattgatgacaaggaacccctcatccccatccagcttgcggat
ggtctgtccagtttggcccccactaacatggcgtcttctccaaccagtcctcatgaggag
gagttcattgactggtggagcaaattctttgcctccataggggagagtgaaaagtgtggc
tcctacttggagaaagattttgacactctaaaggtctatgacacacagctggagaatgtg
gaggcttttgaaggcttgtctgatttctgtaacaccttcaagctttaccgaggcaagact
caggaagagactgaagacccgtctgtcattggtgagtttaagggtctcttcaaaatttat
cccctcccagaagatccagccattcccatgcccccaagacagttccaccagctggctgcc
caggggccccaggagtgcttggtccgaatctatattgtccgagcatttggcctccagccc
aaggaccccaatgggaagtgtgacccttacatcaagatctccataggaaagaagtcagtg
agtgaccaggataactacatcccctgtaccctggagcctgtgtttggaaagatgtttgag
ctgacctgcacgctacctctggagaaggacctgaagatcacgctctatgactatgacctt
ctctcaaaggatgagaagattggggagacagtcattgacctggagaacaggctgctgtct
aagtttggggctcgttgtggactcccacagacctactgtgtctctggaccaaaccagtgg
agggatcagctccgcccttcccagctcctccacctcttctgccagcaaaacagagtcaag
gcccctgtgtatcggacagaccgagtgacgtttcaggataaagagtacaccattgaggag
atagatgctggcaggatcccgaatccacacctgggtccagtggaggagcgtctggctctg
cacgtccttcagcagcaaggcttggtccctgagcacgtggagtcacggcccctctacagc
cccctgcagccagacatcgagcaggggaagctgcagatgtggatcgacctgtttccaaag
gctctggggcggcctggacctcccttcaatatcactcctcggaaagccagaaggtttttc
ctgcgctgtattgtctggaataccaaagatgtgatcctggatgacctcagcctcactggg
gagaagatgagtgacatttatgtgaaaggttggatggtgggctttgaagaacacaaacag
aagacagatgtgcactatcgctccctgggtggcgagggtaacttcaattggaggtttgtg
ttccccttcgactacctgccagccgagcaagtctgctccattgccaagaaggatgccttt
tggagtctggacaagactgagagcaaaatcccagcacgcgtggtgttccagatctgggac
aatgacaagttctcctttgatgattttctgggctccctgcagctggatctcaaccgcatg
cccaagccagccaagacagctgaaaagtgctccttggaccagctagatgacactttccac
ccagaatggtttgtgtccctctttgagcagaagacagtgaagggctggtggccctgtgta
gcagaagagggagagaagaggatcctggcgggaaagttggaaatgaccttggagattgta
gcagagagtgaacatgatgaacggcctgctggccagggacgggatgagcccaatatgaat
ccgaaactggaggacccaaggcgtcctgacacctccttcctatggttcacctctccgtac
aagacaatgaagttcatcctgtggcgtcgcttccggtgtgccatcatcttcttcatcatt
ctcttcatcctgctgctgttcctgggcatctttgtttatgccttcccgaactatgctgcc
atgaagctggtgaagcccttcagctga
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