Perognathus longimembris pacificus (Pacific pocket mouse): 125356333
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Entry
125356333 CDS
T08928
Symbol
Rab11fip5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125356333 (Rab11fip5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356333 (Rab11fip5)
Membrane trafficking [BR:
plop04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125356333 (Rab11fip5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
125356333
NCBI-ProteinID:
XP_048208698
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Position
8:complement(27190487..27224905)
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AA seq
1310 aa
AA seq
DB search
MALVREEERAAGPSRWLPTHVQVTVLRARGLRGKSSGAGSTSDAYTVIQVGREKYSTSVV
EKTQGCPEWREECSFELPPGALDSLLRAQEADAGPAAWAPAPASAACELVLTTMHRSLIG
VDKFLGQATVALDEVFGAGRAQHTQWYKLHSKAGKKEKERGEIQVTIQFTRNNLSASMFD
LSMKDKPRSPFSKLKDKMKGKKKFELESASAILPSSALEDPELGSLGKMGKAKGFFLRHK
LRRSSLTQSNTSLGSDSTLSSASGSLAYQGPASELLTRSPSRSSWLSTEGGRDSTQSPKL
LTHKRTYSDEASQMRVGPPRGLHDLQGHVDAASRSSLCVNGSHIYNEEPQAPLRHRSSIL
GSFPPSSSLHSVSSRPSEEGPPTSDDSWGRGSRGTSSSDMVPGQEELSSQAKVLAVGASC
SGEEEGSRPPEAKPVQVATPIVASSEAVVEKEGARKEERKPRMGLFHHHHQGLSRSEMGR
RSSVGEKGGPALGASPHHSSVGEEKPKSSWFGLRESKESTPKPSLDVSPQVESDPAAPHH
LPCSPWASAHPTPAPTAAPMLSTNLFAAASPAAATAAAATTAPEATPSGFLGVTNPFLTS
LQSNPFFEELVADIALNSPSPAPSLPSASRASPTPLASPGKALPEWDDTFNIFAAGRLHP
EARSKILAPAGMGLEAAGLQDSGLEAVAVKAAEPQEDPGGEKGGSSMWLEPRAPVDSGLD
QQSTNVSVPGPLGSVGTGLSPSAVQLHLSASVSTPDREPSAPEGGAGPSPADSGTSLFSS
PEVLSVWERLPGPDDAPEGQNEETPRSESQHFHELNMMDDSWPWDVVTISPTAETASPVP
HGESDELPAPRARPEPPKESEELPSLELEPEPEPAWESDEGLQSITPPPKPPRLFTPSHS
QVEVEEKEEEEEEKTSGGMNKRGTGIGEDTTPSALVVGPQEDKEESEKLESVESPGALLG
GEGLEKLVEEAASLESGTCPTVPTICPESPVPTPGYSTRLDLPNQQIQGAPEKGEGTEAQ
SQGSGEEELGPPSATPQEADTWALEEDALNPFLSQGSRDPPSLPSTSPPGSRESSIHSGP
EEPPTPPEPAFPPPPLPPWASHRHGGPGSPCSPSLGAWPLASSSPPPGEPASSPGPLEPS
PPGGSPAPSGEDHAAATPASLLVLLPLETRPAEEPQPDASPHPVKPLSAAPVENSPDKKP
PRSSLSTALSSGLEKLKTVTSGSIQPVVPAPQPGQTIDTKRLKDSAVLDHSAKYYHLTHD
ELIGLLLQRERELSQRDEHVQELESYIDRLLVRIMETSPTLLQIPPDAPK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtgcgggaagaggagcgggcggcggggccctcccgttggctacccacgcac
gtccaggtgacggtgctgagggcccgcgggctgcggggcaagagctcgggcgcgggcagc
accagcgacgcgtacacggtgatccaggtgggccgcgagaagtacagcacgtcggtggtg
gagaagactcagggctgccccgaatggcgcgaggaatgctccttcgagctgccgcccggc
gccctggacagcctgctgcgggctcaggaggccgacgcgggccccgcagcctgggccccg
gcccccgccagcgccgcctgcgagctggtgctcaccaccatgcaccgctcgctcatcggc
gtcgacaagtttctgggccaggccaccgtggcattggacgaggtcttcggcgctggccgc
gcccagcacacgcagtggtacaagctacactccaaggcaggcaagaaggagaaggaacga
ggtgagatccaagtcacaatccagttcactcgcaacaatttgagtgctagcatgtttgac
ctatccatgaaagacaagccaagatcccccttcagcaagctcaaggacaagatgaagggc
aagaagaagtttgagctggaatctgcctctgccatccttccaagcagcgctctagaggat
cctgagctgggcagcctgggcaagatgggcaaagccaaaggcttcttccttcgccacaag
ctgcgcagatcatccttgacccagtccaacacctcgctgggctcagacagcaccttatcc
tcagccagtgggagcctggcttaccagggcccagcctcggagctccttactagatctccg
agccgcagcagctggctgtccaccgaagggggcagggattctacacagtcccccaagttg
ctcacccataagaggacctacagtgatgaggccagccagatgcgtgtgggtccgccccgg
ggccttcacgacctccagggccacgtggacgctgcctcccgatcttccctctgtgtcaac
ggaagccacatttacaatgaggagccccaggcccccttgaggcaccgcagttccatcctg
ggctccttcccaccctctagctccctgcacagtgtctcttcccggccctctgaggagggg
cctccgacctctgatgactcatggggcagaggcagtcgtggcaccagcagctcagacatg
gtgccgggacaggaggagctgagctctcaagccaaagtgctggctgttggggccagctgc
tctggagaggaggagggttcccggcctcctgaggcaaagccagtgcaggtcgccacaccc
atagtggcctcctctgaggctgtggtagagaaggagggtgcacggaaggaagagcggaag
cctcgcatgggcctcttccaccatcaccaccaggggctgagtcggagtgagatggggcgc
agaagctctgtgggggagaagggaggtcctgctcttggtgcctccccccaccactcgtcc
gttggggaggaaaagcctaaaagtagctggtttggtctgagagaatccaaggagtcaact
ccgaagcccagcctggacgtgtctcctcaggtagaatctgacccagctgctcctcaccac
ctcccctgctccccctgggcttcggcccaccccactcctgctcccaccgctgctcctatg
ctaagcactaacctttttgcagctgcctctcccgctgctgccactgctgctgctgccacc
acagcccccgaagccaccccatctggattcttgggtgtcaccaacccgttcctcacctcc
ttgcagagcaaccctttcttcgaggagctcgtagcggacatagcactaaactctccttca
cctgctccctctctccccagtgcctcgagggccagccccacccccctggcctcccctggg
aaagccctgcctgagtgggacgacaccttcaacatctttgctgccggcaggctgcatcca
gaggccaggagcaagatcctggcccctgcaggaatggggctggaggcagctgggctgcaa
gactcaggccttgaggccgtggcagtgaaggcagcagagccccaggaagaccctggggga
gaaaaaggtgggagcagcatgtggctggagcccagggctcctgtggactcaggactggac
cagcagagcacaaacgtgtctgtccctgggccccttgggtctgtgggaactgggctgtcc
ccttcggcagtccagttgcaccttagcgcctcggtctcaacaccagacagggagccatct
gccccagaagggggtgctgggccaagtccagcagacagtgggacatctctgttcagctcc
cctgaagtgctcagtgtgtgggagaggctgcctggtccagatgatgcccctgagggccag
aatgaggagacccccagaagtgaaagccagcatttccatgagctcaatatgatggatgat
tcctggccttgggatgttgtcaccatttctcctacagcagagacagcttcaccagtccca
catggagagtctgatgagctgcctgctcctcgggcacggcctgagccacctaaggagagt
gaggagctcccctcactggagctggagccagagcctgagcctgcatgggagtcagatgaa
gggctacagtcaatcacaccacctcccaagccaccgcgtctctttaccccctcacattcc
caggtagaagtggaggagaaggaggaggaagaggaagagaagacttcaggggggatgaat
aagagggggacaggaataggagaagacactaccccaagtgcattggttgttggtccccag
gaggacaaggaagagagtgaaaagcttgagtcagtagagtctcccggagccctgttgggt
ggggaaggcctggaaaagctggtggaagaagctgcctcccttgaatctgggacctgccca
actgtgcccactatctgccctgagagtcctgtccccacacctggttactcaacaagatta
gatcttccaaatcagcagatccagggagctcctgagaaaggagaaggcactgaggcccag
agccaggggtcaggagaggaagagcttgggcctccatcagccactccccaggaggctgat
acctgggccttggaggaggatgccttgaaccccttcttatctcagggaagccgagatccc
cccagcctcccgtccacatcaccaccagggtccagggaatcttccatccactctggtccc
gaagagccacctacacccccagaacctgcctttccacctccccctctcccaccctgggca
agccaccgccacggggggcctggctctccatgttctccctcgcttggagcctggcccctc
gcctcttcctctccacccccaggggagccagcctcatcccctggcccccttgagccctcc
cctcctggaggctcccctgccccaagtggggaggaccacgctgcagccaccccagcctcc
ctgcttgtgcttctgcccttggagacacgaccagctgaggagccacaacccgatgccagt
cctcaccctgtgaagcccctcagtgctgcccctgtggagaacagccctgacaagaaaccg
ccccgctccagtctgagcacagccctgagcagtgggctggagaagctcaaaacagtcact
tccggcagcattcagcctgtggtcccagcaccccagcctggccagactatagacaccaag
aggctgaaggattctgctgtgttggaccactcagccaagtactatcacctgactcatgat
gagctcatcggcctgctcctgcagcgagaacgagagctgagccagcgcgatgaacatgtg
caggagctagagagctacatcgaccgcctgctagtgcgaatcatggagacttcacccaca
ctgctgcagattcctcctgatgcccccaagtag
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integrated database retrieval system
