Perognathus longimembris pacificus (Pacific pocket mouse): 125356365
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Entry
125356365 CDS
T08928
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04814
Motor proteins
plop04962
Vasopressin-regulated water reabsorption
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125356365 (Dctn1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
125356365 (Dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125356365 (Dctn1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125356365 (Dctn1)
05016 Huntington disease
125356365 (Dctn1)
05022 Pathways of neurodegeneration - multiple diseases
125356365 (Dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356365 (Dctn1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125356365 (Dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125356365 (Dctn1)
Membrane trafficking [BR:
plop04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125356365 (Dctn1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
125356365 (Dctn1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
125356365 (Dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
125356365
NCBI-ProteinID:
XP_048208731
LinkDB
All DBs
Position
8:complement(28335839..28368367)
Genome browser
AA seq
1246 aa
AA seq
DB search
MSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRK
YFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKREGADTAAKASKLTTTRRP
KPTRPASTGVPGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPL
PSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQA
DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKE
RVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVK
LQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNL
EEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETV
ADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIE
MELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKF
ELSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCNVDVYKKVGSLYP
EMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQLEDCTMQLADHI
KFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDA
PGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLPVAALEELA
FKASEQIYGSPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAA
LRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADER
IEKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKLRLNSQSKRTIEGLRG
PPPSGIATLVSGIAGGGTPGQAPGSLPGPGLVKDSPLLLQQISAMRLHISQLQHENSILK
GSQMKASLAALPPLHVAKLSLPPHEGPGNELAAGALYRKTSQLLETLNQLSTHTHVVDIT
RTSPAAKSPSAQLMEQVAQLKALSDTIEKLKDEVLKDTVTQRPGATVPTDFATFPSSAFL
KAKEEQQDDTVYMGKVTFSCAAGLGQRHRLVLTQEQLHQLHSRLIS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaggcaagtgcccggcctctgcgggttgggtcccgtgtggaggtgattgga
aagggccacagaggaactgtggcttatgttggggccacactctttgccactggcaaatgg
gtaggcgttattctggatgaagcaaaaggcaagaatgatggaacagttcaaggcaggaag
tatttcacttgtgatgaagggcacggcatctttgtgcgccagtcccagatccaggtattt
gaagatggagcagatactacttctccagagacacccgattcttctgcctcgaaggtcctc
aaaagagagggagctgatacagctgcaaaggctagcaaactgaccacaactcggcggccc
aagcccactcgtccagctagcactggagtgcctggagccagtagctccttggggccctct
ggttcagcatcagcaggtgaattgagcagcagtgagcccagcaccccagctcagactcca
ctggcagcacccatcatccccacaccagccctcacctctcctggagcagcacccccactt
ccttctccctcgaaggaggaagaggggctgagggctcaggtgcgggacctggaggagaaa
ctggagactctgcggctgaaacgggcagaagacaaagcaaagctaaaagagctggagaaa
cacaagatccagctggagcaggtgcaggaatggaagagcaaaatgcaagagcagcaggca
gacctgcagcgacgtctcaaggaggcacggaaggaagccaaagaggctctggaggcaaag
gagagatacatggaggagatggcagacactgctgatgccatcgagatggccactctagac
aaggaaatggctgaagagagggcagagtctctgcagcaggaggtggaggcactgaaggaa
cgtgtggatgagctcaccacagacttggagatcctcaaggctgaaattgaggaaaagggt
tcagatggggctgcatccagttaccaactcaagcagcttgaggagcaaaatgctcgcctg
aaggatgccctggtgaggatgcgggatctctcttcctcggagaagcaggagcatgtgaag
cttcagaagctcatggaaaaaaagaaccaagagttggaagttgtgagacaacagagagaa
cgccttcaggaagagctgagccaggcagagagcaccattgatgagctcaaggaacaggtg
gatgctgctctgggtgctgaggagatggtggagatgctgactgaccggaacctgaatttg
gaagagaaagtgcgggagttaagagagactgtgggcgatttggaagcaatgaatgagatg
aatgatgaactgcaggaaaatgcacgtgagacagaactggagttgcgagagcaactggac
atggcaggtgctcgggtccgggaggcccagaagcgtgtggaagcagctcaggagacagtt
gcagattaccagcaaaccatcaaaaagtaccgccagctgactgcacacctacaggatgtc
aatcgggaactgacaaaccagcaggaagcatctgtggagagacagcaacagccgcctcca
gagacttttgacttcaaaatcaagtttgctgagactaaggcccatgccaaggctattgag
atggaattaagacagatggaagtggcccaggccaaccggcacatgtccctgctgacagcc
ttcatgcctgacagcttccttcgtccaggaggagaccatgactgtgtcctggtgctcctg
ctcatgcctcgtcttatttgcaaggcagaactgattcggaagcaggcccaagagaagttt
gagctaagtgagaactgctcagagaggcctgggctgcgaggagctgcaggggagcagctc
agctttgctgctgggctggtatattcactgagtcttctgcaggccacactacatcgttat
gagcatgccctctctcagtgcaatgtggatgtgtataagaaggtgggcagcctctaccct
gagatgagtgcccatgagcgctccttagatttcctcattgagctgctacacaaggatcag
ctggatgagactgtcaatgtggaacctctcaccaaggctatcaagtactaccagcatctg
tacagcatccaccttgctgaacagctggaggactgtaccatgcagctggctgaccacatt
aagttcacccagagtgccctggactgcatgagtgtggaagtggggcggctgcgtgccttt
ttacagggtgggcaagaggctacagatattgctcttctactccgggacctggaaacatca
tgtagtgatatccgccagttctgcaagaagatccgaaggcgaatgcctgggacagatgct
cctgggatcccagctgctctggcctttggaccacaggtatccgacacactcctagactgc
agaaaacacttgacatgggtggtagctgtactgcaagaggtggcggctgctgctgcccag
ctcattgccccactggcggaaaatgagggactacctgtggctgcattggaggaactggct
ttcaaagcaagcgagcagatctatgggagcccttctagcagcccctatgaatgtctgcgc
cagtcatgcaacatcctcatcagcactatgaacaagctggccactgccatgcaggaaggg
gagtatgatgcagaacggcccccaagcaagcctcctcctgttgaacttcgggctgcagcc
cttcgtgcagagatcacagatgctgaaggcctaggtttgaagcttgaagatcgagagaca
gttattaaagaattgaaaaagtcacttaaaattaagggagaggagctgagtgaggccaat
gtgcggctgagtctcctagagaagaaactggacagtgctgccaaggatgcagatgaacgc
attgagaaagtccagactcggctggaggagacgcaggcgctgctgcggaagaaagagaaa
gagtttgaggagaccatggatgcactccaggccgacatcgaccagctagaagcagaaaag
gcagagctaaagctgcggctaaacagccagtccaagcgcacaattgagggcctccggggg
ccccctccctcaggcattgctaccttggtctctggcattgctggtgggggcactcctggg
caagctccaggctccttgccaggccctgggctggtgaaggattcacccctgctgcttcag
cagatctcagctatgaggctgcacatctctcagctccagcatgagaacagcatcctcaag
ggatcccaaatgaaggcatccttggcagctttgccccctctgcatgttgcaaagctttcc
ctcccaccccatgagggccctggcaatgagctagcagctggggcattgtatcgcaagacc
agccagcttctggagacattaaatcaactgagtacacacactcatgtagtagatatcact
cgcaccagccctgctgccaagagcccatcagctcagcttatggaacaagtggctcagctc
aaggccctgagtgacaccattgagaagctcaaggatgaagtccttaaggatacagtaact
cagcgccctggagccacagtccccactgactttgccaccttcccttcttctgccttcctt
aaggccaaggaagaacagcaagatgatacagtctacatgggcaaagtgaccttctcctgt
gcagctggccttggacagcgacaccggctggtgttgacccaggagcagctgcaccagctt
cacagtcgcctcatctcttaa
DBGET
integrated database retrieval system
