Perognathus longimembris pacificus (Pacific pocket mouse): 125356409
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Entry
125356409 CDS
T08928
Symbol
Xpo1
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
plop03013
Nucleocytoplasmic transport
plop03250
Viral life cycle - HIV-1
plop05164
Influenza A
plop05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125356409 (Xpo1)
03008 Ribosome biogenesis in eukaryotes
125356409 (Xpo1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125356409 (Xpo1)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
125356409 (Xpo1)
05164 Influenza A
125356409 (Xpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125356409 (Xpo1)
03009 Ribosome biogenesis [BR:
plop03009
]
125356409 (Xpo1)
03016 Transfer RNA biogenesis [BR:
plop03016
]
125356409 (Xpo1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125356409 (Xpo1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125356409 (Xpo1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125356409 (Xpo1)
Pre-60S particles
125356409 (Xpo1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125356409 (Xpo1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125356409 (Xpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
125356409
NCBI-ProteinID:
XP_048208808
LinkDB
All DBs
Position
8:33980269..34036069
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgcttgatttcagc
caaaaactggatatcaaccttttagacaatgttgtgaattgcttataccatggagaagga
gcccagcaaagaatggctcaagaagtactgacacatttaaaggaacatcctgatgcgtgg
acaagagttgacacaattttggaattctcacagaatatgaacacaaaatattatggacta
caaattttggaaaatgtgataaaaacaaggtggaagattcttccaaggaaccagtgtgaa
ggaataaaaaagtatgttgttggcctcattatcaagacatcttctgacccaacttgtgta
gagaaagaaaaggtctatatcgggaaattaaatatgattcttgtccagatacttaaacaa
gaatggcctaagcattggccaacttttatcagtgacattgttggagcaagtaggaccagc
gaaagtctttgtcaaaataatatggtgattctgaaactcttgagtgaagaagtatttgat
ttttctagtggacagataacccaagtgaaagcaaagcatttaaaagacagcatgtgcaat
gagttctcacaaatatttcaactttgtcagtttgtaatggaaaattctcaaaatgctcca
cttgtacatgcaaccttggaaacactgctgagattcctgaactggattccactggggtat
atttttgagaccaagttaatcagcacattaatttataagttcctgaatgttccaatgttt
cgaaatgtttctctaaagtgcctcactgagattgctggtgtgagtgtaagccaatatgaa
gaacagtttgtaacactatttacattgacaatgatgcagctaaaacagatgcttccttta
aatactaatattcgacttgcatactcgaatggaaaagatgatgaacagaactttattcaa
aatctcagtttatttctctgcacctttcttaaagaacatggtcaacttatagagaaaaga
cttaatctcagggaaacactcatggaggcccttcattatatgttgttggtatctgaagtg
gaagaaactgaaatctttaagatttgtcttgaatactggaatcatctggcagctgaactg
tatagagagagcccattttctacatctgcttctccattactatctggaagtcagcatttt
gatgttcctcccaggaggcagctgtatttgcctgttttgtcaaaggttcgtttattgatg
gttagtcgaatggctaaaccagaggaagtactggttgtagaaaacgatcagggagaagtg
gtgagagaattcatgaaagatacagattccataaatttgtataagaatatgagagagaca
ttagtttaccttactcatctggattatgtagatacagaaagaataatgactgagaaactt
cacaatcaggtgaatggtacagaatggtcttggaagaatttgaatacgttatgttgggca
ataggctccattagtggagcaatgcatgaagaggatgaaaaacggtttcttgttactgtt
ataaaggatctattaggattatgtgaacagaaaagaggcaaagataataaagcaattatt
gcatcaaatatcatgtacatagtaggtcaatatccaagatttttaagagctcactggaag
tttttgaagacagtagttaacaagctgtttgaattcatgcatgagacccatgatggagtc
caggacatggcttgtgatactttcatcaaaatagctcaaaaatgccgcaggcattttgtt
caggttcaggttggagaagtgatgccgtttattgatgagattttgaacaacattaacact
ataatttgtgatcttcagcctcagcaggttcatacattttatgaagctgtgggatacatg
attggtgctcagacagaccaaacagtccaagaacatttgatagaaaaatacatgctactc
cccaatcaagtgtgggatagtataatccagcaggcaaccaaaaatgtggatatactgaaa
gatccagaaacagtcaagcagcttggtagcatattaaaaacaaatgtgagagcttgcaaa
gctgttggacatccctttgtaattcagcttggaagaatttatttagatatgcttaatgta
tataagtgcctcagtgaaaatatttctgcagctatccaagctaatggtgaaatggttaca
aagcaaccattgattagaagtatgcgaaccgtaaaaagggaaaccttaaagttaatatct
ggttgggtgagtcgatccaatgatccacagatggtagctgaaaattttgttcctcctctg
ttggatgcagttcttattgattaccagagaaatgtcccagctgctagagaaccagaagtg
cttagtactatggccattattgtcaacaagttagggggacatataacagctgaaatacct
caaatatttgatgctgtttttgagtgcacattgaatatgataaataaggattttgaagaa
tatcctgaacacagaacaaacttctttttactacttcaggctgtcaattctcattgtttc
cctgcattcttagctattccacctgcacaatttaaacttgttttggattccattatctgg
gctttcaaacatactatgaggaatgttgctgatacaggcttacagatactttatacactc
ttacaaaatgttgcacaagaagaagctgcagctcagagtttctatcagacttatttttgt
gatattcttcagcatatcttttctgttgtaacagacacctcacatactgctggtttaaca
atgcatgcatcaattcttgcatatatgtttaatttggttgaagaaggaaaaataagtaca
ccgttaaatccaggaaatccagtaaacaaccaaatgtttattcaggaatatgtggctaat
cttcttaagtctgcattccctcatctacaagatgctcaagtaaaactctttgtgactggg
cttttcagcttaaatcaagatattcctgctttcaaggaacatctgagggatttcttagta
caaataaaggagtttgcaggtgaagacacatctgatctgtttttggaagaaagagaaaca
gcccttcgacaggctcaagaagagaaacataaacttcaaatgtctgtccctggcatactt
aatccacatgaaattccagaagaaatgtgtgattaa
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