Perognathus longimembris pacificus (Pacific pocket mouse): 125356417
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Entry
125356417 CDS
T08928
Symbol
Pus10
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125356417 (Pus10)
Enzymes [BR:
plop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
125356417 (Pus10)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125356417 (Pus10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
TPD
Motif
Other DBs
NCBI-GeneID:
125356417
NCBI-ProteinID:
XP_048208819
LinkDB
All DBs
Position
8:34451700..34532407
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AA seq
529 aa
AA seq
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MFPLTEENKLVAHLLLNSGTCPRCIFRFCGVDFHAPYKLPYKELLSDLQKFLEPGKDELV
LEVSNPPLKKIRLQELEDGVDSLTRNGEGNISVIKDGSIASKNSNLSVCNVCLGILQEFC
EKEFIKKVCQKVEASGFEFNNLMLSVSFPPQLSVREHAVWLRVKQEMGKQSLSLGRTDTV
QLKEAYKWITHPLFSEELGVPIDGKSLFEVSVVFAHPETVEDCHFLGAVCPDCFKPSKNK
QSVFTRMAVMKALNKITEEDFQKQFPCPPDSPKTVCTVLEIECAHGAVFLAGRYNKYSRN
LPQTPWIIGGERKLESSVEELISDHLLTVFKAESFNFSSSGREDVDVRTLGNGRPFAIEL
VNPHRVHFTSQEIKELQQKINKSSDKIQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWT
NRPIQKEDTEFLNEIKDLKIDQKTPLRVLHRRPLAVRTRVIHSMEAHYVDEHHFRLYLKT
QAGTYIKEFVHGDFGRTKPNIGSLMNVTADILELDVESVDVDWPPALGD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtttccactgactgaagaaaacaaacttgtggcccacttgttgctcaattctggtacc
tgtccaagatgtatcttcagattctgtggtgtggattttcatgcaccttacaaacttcca
tacaaggagttactcagtgatctacagaaatttctggagcctggaaaagatgaactggtt
ttggaagtttcaaacccacctctcaagaaaattaggctacaagaactggaagatggggtt
gatagtttaactcgaaatggagaaggcaatatctctgttattaaagatggaagcatcgct
tccaagaactcaaatttgagtgtatgcaatgtttgccttggaattcttcaagaattctgt
gaaaaagagtttattaagaaggtatgccaaaaggttgaagcctctgggtttgaattcaac
aacttgatgctttccgtatcctttccaccacagctgtctgtaagagagcatgctgtgtgg
ttgcgggtaaaacaggaaatgggaaagcagagtctgtcgctgggaagaactgatacagtt
cagctaaaagaagcttacaaatggataactcaccccctgttttcagaggaactgggcgtt
cccattgatggaaagagcttgtttgaagtgagtgtggtctttgctcacccagaaacagtt
gaggactgccacttccttggtgcagtttgcccagattgtttcaagccatccaaaaacaaa
cagtcggtattcactagaatggcagttatgaaagctttgaataaaataacagaagaagat
ttccaaaagcagtttccttgtcctccagactcaccaaagactgtatgcactgttcttgaa
attgaatgtgctcatggtgctgtttttttggctgggagatataataagtactcaaggaat
ttaccacaaactccctggataattggtggagaaaggaagttggaatcttcagtggaagaa
ttaatttcagatcatttgttgacagtgttcaaagcagagagttttaatttctcatcatct
ggaagagaagatgtagatgtgagaacattaggaaatggaaggccctttgcaattgaactg
gtgaatcctcatagagtacatttcacttcacaagaaattaaggagcttcagcagaaaatt
aataagtcatctgacaaaatccaagtacgtgacttgcagcttgttacaagagaggcaata
ggacatatgaaagaaggtgaagaagaaaagaccaagacctatagtgccttaatatggaca
aatagaccaatacagaaggaagacactgaattcctaaatgagatcaaggacttaaagatt
gaccagaaaacacctctgcgggtcctccaccgaaggcctttagccgtgcgaactcgtgtc
attcactctatggaggcgcactacgtggatgaacatcactttcgcctctacctgaagact
caagccggaacctacattaaagagtttgtgcatggagattttgggagaaccaaaccaaac
attggctccctgatgaatgtaactgcagacattcttgagctggatgtggagtctgtagat
gttgactggccacctgccctgggtgactga
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