KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125356440
Entry
125356440         CDS       T08928                                 
Symbol
Rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03010  Ribosome
plop04120  Ubiquitin mediated proteolysis
plop04137  Mitophagy - animal
plop04140  Autophagy - animal
plop05012  Parkinson disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05167  Kaposi sarcoma-associated herpesvirus infection
plop05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    125356440 (Rps27a)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125356440 (Rps27a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125356440 (Rps27a)
   04137 Mitophagy - animal
    125356440 (Rps27a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    125356440 (Rps27a)
   05167 Kaposi sarcoma-associated herpesvirus infection
    125356440 (Rps27a)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    125356440 (Rps27a)
   05022 Pathways of neurodegeneration - multiple diseases
    125356440 (Rps27a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:plop03011]
    125356440 (Rps27a)
   04121 Ubiquitin system [BR:plop04121]
    125356440 (Rps27a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plop04147]
    125356440 (Rps27a)
Ribosome [BR:plop03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    125356440 (Rps27a)
  Archaea
    125356440 (Rps27a)
Ubiquitin system [BR:plop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   125356440 (Rps27a)
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125356440 (Rps27a)
  Exosomal proteins of colorectal cancer cells
   125356440 (Rps27a)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 125356440
NCBI-ProteinID: XP_048208875
LinkDB
Position
8:complement(39365116..39367131)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaacccttacggggaagaccatcacactcgaggttgaaccctcg
gataccatagaaaatgtaaaggccaagatccaggacaaggaaggaattcctcctgatcag
caaagactcatctttgctggtaagcagctggaagatggacgcaccttatctgactacaac
attcaaaaggagtccactcttcatttagtgttgagacttcggggtggtgctaagaaaagg
aagaagaagtcttataccactcccaagaaaaacaagcataagaggaagaaggttaaactt
gctgtcctgaaatactataaggtggatgaaaatggcaaaattagccgtcttcgccgagag
tgcccttcagatgaatgtggtgctggagtttttatggctagccactttgacagacattat
tgtggcaagtgttgtctaacttactgtttcaacaaaccagaagacaagtga

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