Perognathus longimembris pacificus (Pacific pocket mouse): 125356446
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Entry
125356446 CDS
T08928
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04517
IgSF CAM signaling
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125356446 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125356446 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125356446 (Sptbn1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125356446 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
125356446 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
125356446
NCBI-ProteinID:
XP_048208886
LinkDB
All DBs
Position
8:complement(39836015..40016906)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSQNIVTDSSSLNA
EAIRQRLANLEQLWRLLFEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMTDTVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAITSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagattacgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgagaacagctctgcacggctcttt
gaacggtcccgcatcaaggctctagcagatgagcgtgaagccgtgcagaagaagaccttc
accaagtgggtcaactctcaccttgcccgagtgtcctgtcggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaagtactctctggagagaggctg
cctaaacccaccaagggcagaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggaacagagagtccatcttgagaacatggggtcccacgacattgtggat
gggaaccaccggctgacccttggcctcatttggaccatcatcctgcgcttccagatccaa
gatatcagtgtggaaactgaagataataaagagaaaaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctggataccccaatgtcaacattcacaattttaccact
agctggagagatggtatggcgtttaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagagcagcaccttggcctcactaaactgttggatcctgaagacatcagcgtggaccac
ccagatgagaagtccattatcacttacgtggtgacttattaccactacttctctaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttttggaatggattgaacaa
accatcattattctgaacaatcgcaaattcgccaattctctggtcggggttcaacagcag
cttcaggcattcaacacataccgcactgtggagaaaccacccaaatttactgagaagggg
aacttggaagtgctgcttttcactattcaaagcaagatgagggccaataatcagaaggtc
tacatgccccgggagggcaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagccgaacatgagagagaactggccctgcggaatgagctcataagacaagagaaactg
gaacagctcgcccgcagattcgaccgcaaggcagctatgagggagacttggctaagtgaa
aaccagcggctggtgtctcaggacaactttggatttgaccttcctgcagttgaagccgct
acaaaaaagcacgaggccattgaaacagacattgctgcatatgaggaacgtgtgcaggcc
gtggtagctgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcacc
gcgaggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagagcccgg
agacagcgtcttgagatgaacttaggcttgcaaaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaaacacttg
cttggtgtggaggacctgttgcagaagcatgcccttgttgaagcagacattggaatccag
gcagagcgtgttaggggtgtcaatgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgaccctcaagtgattcgagaccgcgtggcccacatggagttctgctat
caagagctttgccagctagcagctgagcgccgggcccgcctggaagagtcccgccgtctc
tggaagttcttctgggagatggcagaagaggaaggctggatcagggagaaggagaagatc
ttgtcttctgatgattatgggaaagacctaaccagcgtcatgcgcctgctcagcaagcac
cgggcgtttgaagacgagatgagtggccgcagcggccacttcgagcaggctatcaaggaa
ggtgaagacatgattgcggaggagcactttggatcagaaaagatccgtgagaggatcatt
tacatccgggaacaatgggccaacctggaacagctgtcagccattcggaagaagcggcta
gaggaggcctcgctgctacatcagttccaggcagatgccgatgacattgatgcctggatg
ctggacatcctcaagatagtgtccagcaacgatgtgggccatgacgagtactccacccag
tctctggtgaaaaaacacaaggatgtggctgaagagatcaccaattacaggcccacaatc
gacacgctgcatgagcaagccagcgctctcccccaggctcacgcagagtctcccgatgtg
aggggacggctggcaggaattgaagagcgctacaaggaagtggcagagctcacgcggctg
aggaaacaggcgctgcaggacacattggccctgtacaagatgttcagtgaggctgatgcc
tgtgagctgtggattgatgagaaggagcagtggctcaataatatgcagatcccagagaaa
ctagaggacctagaagtcatccagcacagatttgagagcctcgaaccagaaatgaacaac
caggcttcccgggttgcagttgtaaaccagattgcacgtcagctgatgcacagcggccat
cccagtgagaaggaaatcaaagcccaacaggacaagctcaacacaaggtggagtcagttc
agagaactggttgacaggaagaaggatgctcttctgtctgccctgagtatccagaactac
catcttgagtgcaatgaaaccaaatcttggattcgagaaaagaccaaagttattgaatct
acccaggacctaggcaatgacctggctggagtcatggccctgcagcggaagctgaccggc
atggagcgagacttagtggccatcgaggcaaagctgagtgacctgcagaaggaggcagag
aagctcgagtctgagcaccccgaccaggctcaggcaatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccaccctgaagaaccgagaggcttccctaggagaa
gccagcaagctgcagcagttcctgcgggacttggatgacttccagtcgtggctctccagg
acccaaacagccatcgcctccgaggacatgcccaataccctgaccgaagccgagaagctt
ctcacacagcatgaaaatataaaaaacgagattgacaactacgaggaggactaccagaag
atgagggacatgggtgagatggtcacccagggacagaccgatgcccagtacatgtttctg
cgccagcggctacaggccttggacaccggatggaatgagctccacaaaatgtgggagaac
aggcaaaacctcctctcccagtcccacgcctaccagcagttccttcgggacacgaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaagcaagaggacttcatgactaccatggatgcc
aatgaggagaagatcaatgctgttgtggagactggccggaggctggtaagcgatgggaac
atcaactcagatcgcatccaagagaaagtggactccattgatgacagacacaggaagaat
cgtgaggcagccagtgaacttctgatgagattgaaggacaacagggatcttcagaaattc
ctccaagattgtcaagagctttctctctggatcaatgagaagatgcttacagcccaggac
atgtcttatgatgaagccagaaatctgcacagtaaatggttgaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacagaagccgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctcttcgatgcaaac
aaagctgaacttttcacccagagctgcgcagatctggataaatggctgcatggcctggag
agccagatccaatctgacgattatggcaaagaccttaccagcgtcaacatcctgctgaaa
aagcaacagatgctggaaaaccaaatggaagtacggaagaaagagattgaggagctccag
agccaggcccaagcgctgagtcaggaagggaagagcaccgatgaggtagacagcaagcgc
ctcaccgtgcaaaccaagttcatggagctgctcgaacccttgaatgaaaggaagcataat
ctgctggcctccaaagagatccatcagttcaacagggacgtggaggatgagattttgtgg
gttggcgagaggatgcctttggcaacttccaccgatcatggccacaacctccagactgtt
cagctgctaataaagaaaaaccagactctccagaaagaaatccaggggcaccagcctcgc
atcaatgacatcttagagagaagccaaaacatcgtcactgacagcagcagcctcaatgct
gaggccattagacagaggctcgccaacctggagcagctgtggaggctcctctttgaggag
acagagaaacgccaccggcggcttgaggaggcacacaaggcccagcaatactactttgat
gcagctgaggccgaagcatggatgagcgagcaagagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaagaaacaccaaattttagaacaagcc
gtggaggactacgctgagacagtacaccagctctccaagacaagccgggcactggtggct
gacagccatcctgaaagtgagcgcattagcatgcggcagtccaaagtggataagctgtat
gctggcctgaaggaccttgctgaagagaggagaggcaaactggatgagaggcacaggtta
ttccagctcaaccgggaggtggatgacctggagcagtggattgctgagagggaggtggtc
gcagggtcccatgaactggggcaggactacgagcatgtcactatgttgcaagaacgattc
cgggaatttgctcgagacacagggaacattgggcaggaacgtgtggacactgtcaatcac
atggcagatgatctcatcaactctggacactcggatgctgccaccatcgctgaatggaag
gatggccttaatgaagcctgggctgaccttctggagctcattgacacgagaacacagatt
ctggctgcctcctatgaactgcataagttttatcatgatgccaaggagatctttgggcgt
atccaggacaaacacaagaaactccctgaggagcttgggagagatcagaacaccgtggag
accttacagcgaatgcataccaccttcgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaagatgcagctcgcctccaggcagcctatgcaggcgacaaggctgac
gatatccagaagcgtgagaacgaggtcctggaagcctggaagtccctgctggacgcctgc
gagggccgcagggtgcggctggtggacactggggacaagttccgcttcttcagcatggtg
cgggacctcatgctctggatggaggatgtcatccggcagatagaagcccaggaaaagcca
agggatgtatcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaacgacagtttcacaacctgcattgaacttgggaaatccttgctggctaga
aagcactatgcatctgaggagatcaaagaaaagttactacaactgacagaaaagagaaaa
gaaatgattgacaagtgggaagacagatgggaatggttaagactgattttggaggtccat
cagttctcaagggacgccagcgtggccgaagcttggctgctcggacaggagccataccta
tccagccgcgaaatcggccagagcgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagctacctgggatgagaggttctccgccctggaaaggctgaca
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggcca
ccttctccagagccaagcacaaaggcttcagaggaggccgagtcccagcagcaatgggat
acttcaaaaggagagcaagtttcccagaatggtttgccagctgagcagggatcgccacgg
atgacagatacagtggataccagcgaaatggtcaacggcgctgctgagcagaggacgagc
tccaaagagtccagtcccatcccctccccaacttctgaccgcaaggccaagactgcactc
ccagcccagagtgccgccaccctgccagccaggacgcaggagacgcccgcggcccagatg
gaaggcttcctaaaccggaagcatgagtgggaggcccacaataagaaagcctcaagcagg
tcctggcacaatgtatattgtgtcataaataaccaagaaatgggtttctacaaagacgcc
aagaccgctgcctctggcatcccctaccatagcgaggttcctgtgagcttgaaagaagca
gtctgtgaagtggcccttgactacaagaagaagaaacatgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctccgccatcacctctgacaaacatgacctatctgccagcacccagagcacg
ccagcctcaagccgggcacagaccttacccaccagcgtggtcaccatcaccagcgagtcc
agtcccggcaagcgggagaaggacaaagagaaagacaaagagaagcgcttcagccttttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
