Perognathus longimembris pacificus (Pacific pocket mouse): 125356456
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Entry
125356456 CDS
T08928
Symbol
Nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125356456 (Nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356456 (Nrxn1)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
125356456 (Nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
125356456
NCBI-ProteinID:
XP_048208905
LinkDB
All DBs
Position
8:42715548..43760765
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AA seq
1493 aa
AA seq
DB search
MGTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGVWHHVRIR
RQFRNTTLYIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGDEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSD
EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNA
WHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNF
MGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLP
KWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLL
DMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELY
LGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSR
ETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVV
MHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKG
PETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITE
RRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSS
YVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANL
IKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKE
TYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSN
QGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAI
GFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHV
VRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLT
IFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSM
TTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTKEPISQTTDDILVASAECPSDDED
IDPCEPSSGGLANPTRVGGREPYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYK
YRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgcttcttcagcgtgggggttgttttctcctatgcctttcattgctgctc
ctgggctgctgggcagagctgggcagcgggctggagttcccgggtgccgagggtcaatgg
acacgcttccccaagtggaacgcctgctgcgagagcgagatgagcttccagctcaagacg
cgcagcgcacggggcctcgtgctctactttgacgacgaaggcttctgcgatttcctggaa
ctcatcttgacccgcgggggtcgcctgcaactcagcttctccatcttctgcgccgagccc
gccacgttgctggccgacacgcccgtcaacgacggcgtgtggcaccacgtgcgcatccgc
cgccagttccgcaacaccacgctctacatcgaccaggtggaagccaagtgggtggaggtg
aaatccaagcgcagggacatgacggtgttcagcggcctcttcgtggggggcctgcccccg
gaactgcgcgcagcagcgctcaaactcaccttggcctcggtgagggagcgggagcccttc
aaaggctggattcgagacgtgagggtgaactcctcccaggccctccccgtggacagtggg
gaggtgaagctggacgatgagccacccaacagcggtggggggagcccctgtgaggcgggc
gatgagggcgagggcggggtgtgcctcaacggaggcgtgtgctcggtggtggacgaccag
gccgtgtgtgactgctcgaggactggcttccgtggaaaggactgcagccaaggtctggcg
cacctgatgatgggcgaccaaggtaaaagtaaaggaaaagaagaatacatcgccactttc
aagggttctgaatacttctgctacgatttgtctcaaaaccccattcagagcagcagtgat
gaaataactctgtcctttaaaactcttcagaggaatggactgatgcttcatactgggaaa
tcagctgattatgtcaatcttgccttgaaaaatggagctgtctctctggtcattaatttg
ggatcaggggcctttgaagcactagtggagcccgtgaatggaaagtttaatgataatgcc
tggcatgatgtgaaagtcaccaggaatctgcgtcaggtgacaatatcagtggatgggatt
ctcaccacaacgggctacacacaagaagattatactatgctggggtctgatgactttttc
tatgttggaggcagtcccagcacagcagacctgccagggtcacccgtcagcaacaacttt
atgggctgtctcaaagaggttgtatataaaaataatgacgtaagactggaattatctcga
cttgccaagcaaggagaccctaagatgaaaattcatggagtggtggcatttaaatgtgaa
aatgtggccacattagacccaatcacctttgaaaccccagagtccttcatctctttgcct
aagtggaatgccaagaaaaccggttccatatcttttgatttccgcacaacagagccaaat
ggcctcatcttatttagccatggcaagccgagacatcaaaaagatgccaagcacccacag
atgattaaggttgacttctttgctattgagatgctggatggacacctctacctcctcctg
gatatggggtcagggactatcaaaataaaagccttgcagaaaaaagtgaatgatggagaa
tggtatcatgtggatttccagagagatggacggtcaggtaccatttctgtcaacacactg
cgaacaccctacacggctcctggcgagagtgagattctggacctggatgatgagctgtac
ctggggggcttgccagaaaataaggctggccttgtcttccccaccgaggtgtggactgcc
ttgctcaactatggctacgtgggctgtatccgggatctgttcattgatggccagagcaaa
gacatccggcaaatggctgaaattcaaagtactgctggagtgaaaccctcctgctcacgg
gagacagcaaaaccgtgccttagcaatccttgcaagaataatggcatgtgcagggatggg
tggaacagatatgtctgcgattgctccggaacaggctatcttggcagatcctgtgaaaga
gaggccacggttttgagctatgatgggagtatgtttatgaaaatccagcttccagtggtc
atgcacacagaggctgaggatgtgtccctaaggttcaggtcccagcgtgcatatggtatc
ttgatggccaccacctcccgggactcagcagacactctgcgcctggagctggatgcaggg
cgtgtgaaactcactgtcaacttagattgtatcaggattaactgtaattccagcaaaggt
cctgagaccctttttgctggctataacctcaatgataatgaatggcacacagtacgtgtg
gttcgtcgaggaaaaagtttaaagttaacagtcgatgatcaacaggccatgacaggccaa
atggccggtgatcatacaaggctggaattccataacatagagactggcataatcacagag
cgacgatatctttcttctgtcccctccaacttcattggacacttgcagagtctgacattc
aatggaatggcatacattgacttgtgtaaaaatggtgacatagattactgtgagctcaat
gcccgatttggcttcaggaacatcatagcagaccctgtcaccttcaagaccaaatcaagt
tatgttgccttagctacattgcaagcctacacttctatgcatctctttttccagttcaag
acaacatctctagatggattaattctgtataacagtggagatggaaatgactttattgtg
gttgaactagtgaaagggtacttacattatgtgttcgacttgggaaatggtgctaacctc
atcaaagggagctcaaacaaaccactcaatgacaatcaatggcataatgtgatgatttcc
agggacaccagcaatctccacactgtaaagattgacacaaaaatcaccacacaaatcact
gcaggagccaggaacctagacctcaagagtgacctgtatataggaggagtggccaaagaa
acatacaagtccctgccaaaacttgttcatgccaaggaaggctttcagggctgcctggca
tctgttgatttaaatggacggcttccggatctcatctctgatgctcttttctgcaatgga
cagattgagagaggatgtgaagggcccagcacaacctgccaagaagactcatgttctaat
caaggtgtgtgcctgcagcagtgggatggcttcagctgtgactgcagcatgacatccttc
agcggcccgctctgcaatgaccctgggacaacatatatctttagcaaaggtggtggacaa
atcacgtataaatggcctccaaatgaccggccgagtacacgagcagatagactggccata
gggtttagcactgttcagaaagaagctgtattggtacgagtggacagctcttcaggcctg
ggtgattacctagaactgcatatacatcaaggcaaaattggggttaagtttaatgttggg
acagacgacatcgccattgaagagtccaatgcaatcattaatgatggaaaataccatgta
gtgcgattcacaaggagtggtggcaatgccacgttacaggtggatagctggccggtgatt
gagcgctaccctgcaggaaacaatgataacgagcgcctggcgattgctagacagcgaatt
ccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcaca
atcttcaatagccaagcaaccataataattggcgggaaagagcagggccagcccttccag
ggccagctctctgggctttactacaatggcttgaaagttctgaatatggcagccgaaaac
gatgccaacatcgccatagtgggaaatgtgagactggttggtgaagtgccttcctctatg
acaactgagtcgacagccactgccatgcagtctgagatgtccacttcaatcatggagacc
accaccaccttggctaccagcacagcaagaagaggaaagccccccacgaaagagcccatt
agccagaccaccgatgacatcttggtggcctccgcagagtgtcctagcgacgatgaggac
attgacccctgtgagccgagctcaggtgggttagccaacccaacccgcgtgggcggccga
gagccttacccgggctcagcagaggtgatccgggaatccagcagtaccactggcatggtg
gtgggtattgtggctgcagccgccctgtgcatcctcatcctcctctacgccatgtacaaa
tacagaaaccgtgacgaaggatcctaccatgtggatgagagtcgaaactacatcagtaac
tcggcacagtccaatggagctgtggtaaaggagaaacaacccagcagtgcgaaaagcgcc
aacaaaaacaagaaaaacaaggataaagagtattacgtctga
DBGET
integrated database retrieval system
