Perognathus longimembris pacificus (Pacific pocket mouse): 125356601
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Entry
125356601 CDS
T08928
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125356601 (Wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125356601 (Wdr43)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125356601 (Wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
WD40_like
UTP15_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Zip
NBCH_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
125356601
NCBI-ProteinID:
XP_048209157
LinkDB
All DBs
Position
8:complement(59599720..59651936)
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AA seq
681 aa
AA seq
DB search
MAAGGGGSCEPLASAGVPCAFSPDRQAYFALASADGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEAIATSDQIDLLALGTAVGSILLYSTVKGELHSKL
ISGGHDNRVNCIQWHQDSGCLYSCSDDKYIVEWDLESCKVKCKWKGDNSSVTSLCISPDG
KMLLSAGRTIKLWILETKEVYRHFTGHATPVSTLMFTTVRPPNESQPFDGISGLYFLSGA
VHDRLLNVWQVRSENKEKSAVMSFTVTDEPVFIDLGLSENKEEPVKLAVVCRDGQVHLFE
HVLNGHCKKPLMSSCTIQIATPGKGKKSSPKPIPILAAGFCTDKMSLLLVYGNWFQPTIE
RVALNSKEAHMCLVRDISNSWAPKVETAVTKVRTPVMDSEVKVLVPGIPGHHAPVKPPLP
PQAKEVDSKRKLGGKEVSIEERLGAMDIDTKGNKEDLLQTNSFPVLLTQGLESNDFEMLN
KVLQTRNLNLIKKTVLRIPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLS
TLPDLVHQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASERTKKMASPEQKAKLVY
EEESSEEESDGEIGDKDSDDDWDEEEEEKESGKDEEADEEEEEEEEDGQEKDENGEDREM
ASEKEFNGESDLDPENESEEE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggcggcggtagctgcgagcccctggcctcggccggggttccctgcgcc
ttctctcccgacagacaggcctatttcgcgttggcctcggccgacggccacttgcgagtg
tgggagaccgccaacaaccgactgcaccaggaatatgtgccttccgcgcacctcagcggt
acctgtacctgcctggcctgggcgccagcgcggctgcaggccaaggaaagtcatcagagg
aaaaaaaggaaatcagaagctatagcaaccagtgaccagattgatttgttggctcttggt
acagcagttggtagtattttattgtacagtacagtgaaaggagagttgcacagtaaatta
ataagtggtggacatgacaacagagtcaattgcatacagtggcatcaagacagtggctgc
ttatatagttgttcagatgataaatatattgtggaatgggatttagagagctgcaaagta
aagtgcaagtggaaaggagacaatagcagcgtcacttccctgtgtattagtccagatgga
aagatgttactttcagctggtcgaacaatcaaactgtggattttggagactaaagaagtc
tacagacacttcacaggacatgcaacgccagtttcaacacttatgttcactactgtccga
cctcccaatgagagccaaccttttgatggaatttcaggtctttatttcttatctggagca
gtacatgaccggttacttaatgtctggcaggtccggtcagaaaacaaagaaaagagtgca
gtaatgtctttcacagttacagatgaacctgtttttattgacttgggtttatcagaaaac
aaagaagagcctgtcaagttagcagttgtttgcagagatggtcaagtccatctttttgaa
cacgtattaaatggacattgcaaaaagcctttgatgtccagctgcacaattcaaatagca
acacctgggaaaggcaagaaatcatcaccaaaacctatccctattctagcagctggcttc
tgcacagacaaaatgtctttgctgcttgtgtatggcaattggtttcagcctactattgag
cgagtggctttaaactccaaagaagctcatatgtgtttagtacgggatatttcaaattcc
tgggcccccaaagtagaaacggctgtgacaaaggtgagaacaccagtcatggattctgaa
gtaaaagtcctggttcctggaatccctggacaccatgcgcctgtcaagcctcctcttccc
ccacaagcaaaggaagtagacagcaagaggaaattagggggtaaagaggttagcattgaa
gaacgcctgggagcaatggatatagatacaaaaggaaataaggaggaccttctgcagacg
aatagctttccagttcttctgacacagggtttagagagcaatgatttcgaaatgctaaat
aaagtacttcaaactaggaatttaaaccttataaagaagactgtgttaaggatacccttg
catgctgttatcccattgttgcaagagcttaccaagcggttgcaaggacacccaaatagt
gctgtgttaatggtccaatggctgaaatgtgtgttaacggttcatgcatcatacctatct
acgttgcctgatcttgtacaccagctggggacactctatcagctcatggaaagcagagta
aaaacttttcagaaactctcccaccttcatggcaaacttattctgctaatcacgcaagtt
acagcatcagagaggacgaagaaaatggcctctccggaacagaaggcaaaattggtgtat
gaagaagaatcttctgaagaggagtcagacggtgaaattggagataaggattctgacgat
gattgggatgaagaggaggaggagaaagaaagtgggaaagatgaggaggcagatgaagag
gaggaggaagaagaggaggatggtcaagaaaaagacgaaaatggcgaggacagagagatg
gcaagtgaaaaggaattcaatggggagtctgacttggatccagagaatgaaagtgaagag
gagtaa
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