Perognathus longimembris pacificus (Pacific pocket mouse): 125356759
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Entry
125356759 CDS
T08928
Symbol
Trappc12
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125356759 (Trappc12)
Membrane trafficking [BR:
plop04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125356759 (Trappc12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_6
TPR_16
Coatomer_E
TPR_17
TPR_MalT
TPR_9
IL28A
TPR_15
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
125356759
NCBI-ProteinID:
XP_048209428
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All DBs
Position
8:complement(76385290..76434647)
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AA seq
796 aa
AA seq
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METADQKVREDSPQAQGATQSGPQQVPREEPGQRLHHEETIDLSGDEFGSENETLSEGSN
NFVDKLNEQMMESVLISDSPNNSEGDAGDLSCLQDVVAPVGGSTDHRLASMADKEDMDLL
SSHSDADGGHTPQDMSDTTPDSRASSKEDPTQEEVKDIPTLGNASAGDLVPRDENTQPEE
QASEMSSSQSSSKDDPVPVCTIFSQGSSTPSQPHLFLQDGFESQMVKSPSFSSASETSAK
TPPQTVQPSPSLSQFFGDTMNTNSLASDFFDSFTTSTFISVSNPNAGSSAPEKLSSLSAP
EGENSPDSADPSYSTGLERSESGISTSSLEIPESPKPFSQMQAVFAGNDDPFATALSMSE
MDRRNDAWLPCQATRDVLVAVATQQYNTVFIDKENLTMPGLKFDNIQGDAVKDLMLRFLG
EKAAAKRQVLNASSVEQSFVGLKQLISCKSWRAAVDLCGCLLTAHGQGYGKSGLPTSHTT
DSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRI
LHAELQQYLGNPQEALDRLHRVKTVCSKILANLEQGLAEDGGLSSVPQESRQASIQLWRS
RLGRVLYSMANCLLLMKDYVLAVDAYRAVITYHPEQEPQLLSGLGGGRILLQQIGDIKTA
EKYFQEVERAAQKLEGLQGKTMVLMNRAFLHLGQNNFAEAHRFFTEVLKVDPANAVANNN
AAVCLLYLGKLKASLRQLEAMVRRAPRQCLHESVLFNLTTMYELESSRSMQKKQGLLEAV
AGREGDSFNTQCLKLA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagactgctgaccagaaggtcagggaggactctcctcaggcacagggggccacccag
agcggcccccagcaggtgccccgggaggaaccagggcagcgtctgcatcacgaggagacc
attgacctcagcggagatgagtttggatctgagaacgagaccctatccgaaggttctaac
aactttgtagacaagcttaatgagcagatgatggagagcgtcctcatttctgactctccg
aataacagcgaaggtgacgcgggtgacctcagctgcttgcaggatgtggtggcacccgta
ggaggcagcacggatcacagactggccagcatggcagataaagaagacatggaccttctg
agcagccacagtgacgctgatggcggccacacacctcaggacatgtccgacacgacccct
gatagccgggcatcttccaaagaagatcccacacaggaagaagtgaaagacattcccacg
ttggggaatgctagtgcaggggatttggtgcccagggacgagaacactcagcccgaagag
caggcttcagaaatgtcctctagtcagtcctcctccaaagatgatcctgtgcctgtgtgt
accattttcagccagggaagttcaactccttcccagccacacctgtttctgcaagatggc
ttcgagtcccaaatggtgaaatcaccaagcttcagcagcgcaagcgagacatcggccaag
acgcctccacagacggtccagcccagccccagcctgagtcagttctttggtgacaccatg
aacaccaactccctggcctccgacttctttgactctttcaccacttccacgttcatttct
gtcagtaaccccaacgccggctcttcggctccagaaaagttgtcttcactctctgcccct
gagggagaaaactcccccgactctgccgacccgtcttactctacagggttggaaagatcc
gagtcaggtatttctacgtcttctctggaaatccctgagtctccaaaaccattctcccag
atgcaggccgtgtttgcagggaacgatgacccctttgccacagccctgagcatgagcgag
atggaccgaaggaacgatgcgtggctcccctgccaggcgaccagagacgtcctggtcgct
gtagccacccagcagtacaacactgtgttcatagacaaggagaacctcaccatgccaggc
ctcaagttcgacaacattcagggagatgcagttaaagacctgatgcttcgcttcctaggt
gagaaggcagcagccaagaggcaggtcctaaacgccagctcggtggagcagtccttcgtg
ggcctcaagcagctaattagctgcaagagctggagggcggccgtggacctgtgcggatgc
ctcctcaccgcccacggccagggctacggcaagagcgggctgcccaccagccacaccaca
gactccctccagctttggtttgtgaggctggcactgctggtgaagttaggccttttccag
aatgccgaaatggaatttgagccctttggaaatctggaccagccagatctttattacgaa
tactacccgcacgtgtacccagggcgcaggggctccatggtccccttctccatgcgcatc
ctgcacgccgagctgcagcagtatctgggcaatccacaggaggccctggacagactccac
agggtcaagacggtctgcagcaagatcttggccaacttggagcaaggcttagctgaagac
gggggcctgagcagcgtcccacaggagagcagacaagcgtccatccagctgtggcggtcc
cgcctgggccgcgtgctgtactccatggccaactgcctgctcctgatgaaggactacgtg
ctggccgtggacgcctaccgggcggtcatcacctaccaccccgagcaggagccgcagctg
ctgagcggcctgggggggggccgcatcctcctccagcagattggagacatcaagaccgcg
gaaaaatacttccaggaggtggagcgagcggcccagaagttggagggcctgcagggtaaa
accatggtcttgatgaacagggccttcctgcacctgggccagaacaacttcgccgaggcc
caccgcttcttcacggaggtcctgaaggtggaccccgcaaacgcggtggccaacaacaac
gcggccgtgtgcctgctgtacctgggcaagctgaaggcgtcgctgcggcagctggaggcc
atggtgcggcgcgcgccccgccagtgcctgcacgagagcgtgctcttcaacctcaccacc
atgtacgagctcgagtcctcgcgcagcatgcagaagaagcagggcctgctcgaggccgtg
gccggccgggagggcgacagcttcaacacgcagtgcctcaagctggcctag
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