Perognathus longimembris pacificus (Pacific pocket mouse): 125356842
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Entry
125356842 CDS
T08928
Symbol
Edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04060
Cytokine-cytokine receptor interaction
plop04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125356842 (Edar)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125356842 (Edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
plop04050
]
125356842 (Edar)
Cytokine receptors [BR:
plop04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125356842 (Edar)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
KI67R
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
125356842
NCBI-ProteinID:
XP_048209504
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Position
8:complement(10452220..10477466)
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AA seq
448 aa
AA seq
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MAHMGDCKWTPWLPVLVVSLMCSARAEDSNCGENEYHNQTTGMCHQCPPCGPGEEPYMSC
GYGTKDEDYSCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDMENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECVGATSGVSANSPSTSGGSTLSPFQHAHKELSG
QGHLATALIIAMSTIFIMAIAIVLIIMFYIMKTKPSAPACCSSPPGKSVEVPVSKDEEKK
EAPDSVVIFSEKDEFEKLTATPAKTTKSENDASSENEQLLSRSVDSDEEPASDKQGSPEL
CLLSLVHLAREKPATNNKSAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRML
SSTYNSEKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIER
LDAVESLCADILEWAGVVPPVSPPPAAS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcccatatgggggactgtaagtggacgccctggctccctgtcctggtggtatctctg
atgtgctcagccagggcagaagactccaattgtggtgagaatgagtaccacaaccagacc
accggaatgtgccaccagtgccccccctgtgggccgggagaggagccctacatgtcctgc
ggctatggcaccaaagatgaagattacagctgtgtgccctgcccagcagagaagttttcc
aaaggaggctaccagatatgcaggcgccacaaagactgtgagggcttcttccgggccacc
gtgctgacaccaggggacatggagaacgatgctgagtgtggcccgtgtctcccgggttac
tacatgttggaaaacagacccaggaacatctacggcatggtctgctactcctgcctcctg
gcgcctcccaacaccaaggaatgtgtgggagccacgtcgggggtctccgccaattccccc
agcacctccggcggcagcaccctgtcccctttccagcacgcccataaagagctgtctggc
caaggccacctggccaccgccctcatcatcgccatgtccaccatcttcatcatggccatc
gccattgtcctcatcatcatgttctacatcatgaagaccaagccgtcggctccagcctgc
tgttccagccctccagggaagagtgtggaagtcccagtgagcaaggatgaggagaagaag
gaggccccagacagtgtggtgattttctccgagaaggatgaatttgagaagttgacagcg
acaccagccaagaccactaagagtgaaaacgacgcctcctcagagaacgagcagctactg
agccgcagcgtggacagcgatgaggagccagcctctgacaaacaggggtccccggagctg
tgtctgctgtcactcgttcacctggcgagggagaagccagccaccaacaacaaatccgct
gggatccaaagccgaaggaagaagatattggacgtgtacgccaatgtgtgtggtgttgtt
gaaggtctcagccccacggagctgcccttcgactgcctggagaagaccagccgcatgctc
agctccacgtacaactcggagaaggccatcgtgaagacgtggcgccacctggccgagagc
tttgggctgaagcgggatgagatcgggggcatgacggacggcatgcagctcttcgaccgc
atcagcacggcgggctacagcatccccgagctgctcaccaagctggtgcagatcgagcgg
ctggacgccgtggagtcgctgtgcgcggacatcctggagtgggccggggtggtgcccccc
gtgtccccgcccccggctgcgtcctga
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