Perognathus longimembris pacificus (Pacific pocket mouse): 125356852
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Entry
125356852 CDS
T08928
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125356852 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125356852 (Otx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125356852 (Otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
GIP4
Motif
Other DBs
NCBI-GeneID:
125356852
NCBI-ProteinID:
XP_048209513
LinkDB
All DBs
Position
8:19039959..19044843
Genome browser
AA seq
354 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAGLGGNPAVAAASSLSTPAASSIWSPAS
ISPGSAPASVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSSS
YFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHHH
HQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatatggcatgaatggactgggcctagctgggcct
gccatggacctcctacacccctccgtgggctatccagccaccccgcggaagcagcggcgg
gagcgcaccaccttcacgcgctcacagctggacgtgctcgaggcgcttttcgcaaagact
cgctaccctgacatcttcatgcgtgaggaggtggcgctcaagatcaacctgcccgagtcc
agagtccaggtctggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aacggaaccaagagccgcccggtgaagaagaagtcgtccccggtgcgggagagctcgggc
tccgagagcagcggccagttcacgccgcccgccgtgtccagctcggcgtcctcgtccagc
tcggcgtccagcgcctcggccaatcccgcggccgccgcgggcctgggcgggaacccggcg
gtggccgcggcgtcgtcgctgagtaccccggcggcttcgtccatctggagcccggcctcc
atctcgcccggctcggcgcccgcgtccgtgtcggtgcccgagccgctggccgcgcccagc
aacgcctcgtgcatgcagcgctcggtggccgccggcgcggccacggccgccgcctcgtac
cccatgtcctacggccagggcggcagctacggccagggctaccccgcgccctcctcgtcc
tacttcggcggcgtggactgcagctcttacctagcgcccatgcactcgcaccaccacccg
caccagctcagccccatggcgccctcctccatggcgggccaccaccaccaccacccgcac
gcgcaccaccccttgagccagtcctccggccaccaccaccaccaccaccatcaccaccac
caccaaggctacggaggctcggggctcgccttcaactcggccgactgcttggattacaag
gagcctggcgcggccgcggcctcctcggcctggaaactcaacttcaactcgcccgactgt
ctggactataaggaccaagcgtcatggcggttccaggtcttgtga
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