Perognathus longimembris pacificus (Pacific pocket mouse): 125356905
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Entry
125356905 CDS
T08928
Symbol
Six2
Name
(RefSeq) homeobox protein SIX2 isoform X1
KO
K19472
homeobox protein SIX2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125356905 (Six2)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
125356905 (Six2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Phage_mat-A
YdaS_toxin
FAM199X
Motif
Other DBs
NCBI-GeneID:
125356905
NCBI-ProteinID:
XP_048209543
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All DBs
Position
8:47596270..47599860
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AA seq
305 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENSENSSSNSHNPLASSLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLS
PPPPGLPSLHSLGHPPGPSAVPVPVPVPVPVPVPGGGGTDPLQHHHGLQDSILNPMSANL
VDLGS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgcccaccttcggcttcacgcaggagcaagtggcgtgcgtgtgcgaggtg
ctgcagcagggcggcaacatcgagcggctgggtcgcttcttgtggtcgctgcccgcctgc
gagcacctccacaagaacgaaagcgtgctcaaggccaaggccgtggtggccttccatcgg
gggaacttccgcgagctctacaagatcctggagagccaccagttctcgccacacaaccat
gccaagctgcagcagctgtggctcaaggcgcactacatcgaggctgagaaactgcgcggc
cggcccctgggtgcggtgggcaagtaccgggtgcgccgcaagttcccgctgccgcgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgtgctgcgc
gagtggtacgcgcacaacccctacccgtccccacgtgagaagcgcgagctggccgaggcc
accggcctcaccaccacgcaggtcagcaactggttcaagaaccggaggcagcgagaccga
gcggccgaggccaaggaaaggtacgaggagaacagcgagaactccagttccaacagccac
aacccgctggcttcctcgctcaatggcagcggcaagtcggtgctaggcagctcggaagac
gagaagacgccgtcggggacgccggaccactcgtcctccagccctgcgctgttgcttagc
ccgccgcccccggggctgccctccctgcacagcctgggccaccctcccgggcccagcgcc
gtgcccgtgcccgtgcccgtgccggtaccggtacccgtgcctggcggaggcggcacggat
ccgctgcaacaccaccatggcctgcaggactccatcctcaaccccatgtcggccaacctc
gtggacctgggttcctag
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