Perognathus longimembris pacificus (Pacific pocket mouse): 125357093
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Entry
125357093 CDS
T08928
Symbol
Atg5
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04136
Autophagy - other
plop04140
Autophagy - animal
plop04211
Longevity regulating pathway
plop04213
Longevity regulating pathway - multiple species
plop04216
Ferroptosis
plop04621
NOD-like receptor signaling pathway
plop04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125357093 (Atg5)
04136 Autophagy - other
125357093 (Atg5)
09143 Cell growth and death
04216 Ferroptosis
125357093 (Atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125357093 (Atg5)
04622 RIG-I-like receptor signaling pathway
125357093 (Atg5)
09149 Aging
04211 Longevity regulating pathway
125357093 (Atg5)
04213 Longevity regulating pathway - multiple species
125357093 (Atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125357093 (Atg5)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125357093 (Atg5)
Membrane trafficking [BR:
plop04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125357093 (Atg5)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125357093 (Atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF8018
Motif
Other DBs
NCBI-GeneID:
125357093
NCBI-ProteinID:
XP_048209709
LinkDB
All DBs
Position
9:13297689..13370014
Genome browser
AA seq
275 aa
AA seq
DB search
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDA
IEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN
GFRYIPFRIYQTTTEQPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTSEDGEKKNQVMI
HGIEPMLETPLQWLSEHLSYPDNFLHISIIPQPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacaaagatgtgcttcgagatgtgtggtttggacgaattccaacttgcttc
actctctatcaggatgagataactgaaagggaagcagaaccatattatttgcttttgcca
agagtaagttatttgacgttggtaactgacaaagtgaaaaagcattttcagaaggttatg
agacaagaagacattagtgagatatggtttgaatatgaaggcacaccactgaaatggcac
tatccaattggtttgctatttgatcttcttgcatcgagttcagctcttccttggaacatc
acagtacattttaagagttttccagaaaaggaccttcttcactgtccatctaaagatgca
attgaagctcattttatgtcttgtatgaaagaagctgatgctttaaagcataaaagtcaa
gtaattaatgaaatgcagaaaaaagatcacaagcagctttggatgggactacaaaatgac
agatttgaccaattttgggccatcaaccggaaactcatggaataccctgcagaagaaaat
ggatttcgttatatcccctttagaatatatcagacaacgacggaacagccttttattcag
aagctctttcgtccagtggctgcagatggacagctgcatacactaggagatctcctcaaa
gaagtctgtccttctgcagttacttctgaagatggggaaaagaagaatcaagtcatgatt
catggaattgaaccaatgttggaaacgcctttgcagtggctcagtgaacatctgagctac
ccggataattttcttcatattagcatcatcccgcagcccacagattga
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integrated database retrieval system
