Perognathus longimembris pacificus (Pacific pocket mouse): 125357101
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Entry
125357101 CDS
T08928
Symbol
Ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125357101 (Ascc3)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125357101 (Ascc3)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125357101 (Ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
T2SSE
AAA_19
IstB_IS21
YxiG
Motif
Other DBs
NCBI-GeneID:
125357101
NCBI-ProteinID:
XP_048209724
LinkDB
All DBs
Position
9:17028962..17271913
Genome browser
AA seq
2203 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVVDLKLKRSKLQEQVLDLGPTWNTIVKFLNEKLEK
SQMQNINEDLRDILQAAKQIVGMENGREAIESGAAFLFMTFHLKDSVGHMETKAIKQMFG
PFPSSSATAACNATNRIVSHFSQDDVTALVQLTEKGCSNRVFFGKNLAFSFDMHDLDHFD
ELPINGEAQKTISLDYKKFLNEHFQEHGTPELKPVEKTNGSFLWCEVEKYLNATLKEMIE
APRIEDLCCTLYDMLASVKSGDELQDELFELLGPEGLDLIEKLLQNRITIVDRFLNSSSE
HKFQVLQDNCKKILGENTKPNYGCQVTIQSEQEKQLMKQYRREEKRIARREKKAGEDGEV
SGEGLFSFDPKELRMHREQALLNARSVPILNRQRDTDVEKLRYPHVYDSQAEARKTSAFI
AGAKMILPEGIQRENNKLYEEVRIPYSEPMPIGFEEKPVYIQDLDEIGQLAFKGMKRLNR
IQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHYQQGVIKKNEFKIVYVAPM
KALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAT
FLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVLKQVKSGHQVM
VFVHARNATVRTAMSLIERAKNCGQISCFLPTQGPEYGHAEKQVQKSRNKQVRELFPDGF
SIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFV
DLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLN
AEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTLRKHREQLVIEVGR
KLDKAQMIRYEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAE
EFDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKKLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVT
LSVSPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEPQLLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGCKAYE
ALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNNYPTSKAVYIA
PLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQ
NRSYVKQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTERPVRIVGLSTALANARDL
ADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIGTVRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEI
AGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLGDVSHESVNKFLSHLIEKSLVELELSY
CIEIAEDNRSIEPLTFGRIASYYYLKHQTVKMFKDRLKPESSTEELLSILSDAEEYTDLP
VRHNEDHMNSELAKCLPIEVNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAANQGWLVTALNITHLVQMVIQGRWLKDSDLLTLPNIEQHHLHLFRKWN
PATKGPHAKCRTSIECLPELIHACGGKDHVFSSMVEKELQAAKTKQAWNFLSRLPVINVG
ISVKGSWDDLAEGQHELPVSTLTADKRDDNKWIRLHADQEYVLQVSLQRAHFGFHKGKQE
SCAVAPRFPKSKDEGWFLILGEVDKRELIALKRIGYVRSHQDISISFYTPEIPGRYIFTL
YLMSDCYIGLDQQYDIYLNVTQASISTQVDTEVSEAFTDLALK
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgcctcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtggttgacttaaagctgaagcgttccaaactccaagaacaagtt
ttagatttgggtccaacatggaacactatagtgaaatttttgaatgaaaaactggaaaag
agtcaaatgcaaaacataaatgaagacttaagagatatattacaagctgcaaaacaaata
gttggaatggaaaatggaagagaagccattgagagtggagctgcatttctctttatgacg
tttcacttgaaggactctgttggtcacatggagactaaggctatcaaacagatgtttggt
ccctttccatcatcatctgcgactgcagcttgtaatgccactaaccgaattgtttctcat
tttagtcaagatgatgttactgctcttgtccagctgacagaaaagggatgtagcaataga
gtattttttggtaaaaatttagcattttcatttgatatgcacgatctggaccactttgat
gaactgccaataaatggtgaagcccagaaaactataagcctagattataagaagtttctg
aatgaacattttcaggaacatggcaccccagaactcaagcctgtggaaaaaacaaatggt
tccttcttgtggtgtgaagttgagaaatatttaaatgcaacattgaaggaaatgattgaa
gcaccaagaatagaagatctttgctgtaccttatatgatatgcttgcttctgttaaaagt
ggtgatgagcttcaggatgagctatttgaattgctgggacctgaaggacttgatcttatt
gagaagctccttcagaacagaatcacaattgtggatagattccttaattcatccagtgaa
cataagtttcaggttcttcaagacaattgcaaaaaaattttaggagagaacactaaacct
aattatggttgtcaagtcactattcagtctgaacaagaaaagcagttaatgaaacagtat
cgccgtgaggagaagagaattgccagaagagagaaaaaggctggagaagatggagaagtt
tctggagagggacttttctcttttgatcccaaggaattgcgtatgcacagagagcaggcg
cttctgaatgccagaagtgttccgattctgaacaggcaaagagatacagatgttgaaaaa
ctacgttatccccatgtttatgattctcaagcagaagccaggaaaacatcagcattcatt
gctggtgcaaagatgattttaccagaaggaatccagagagagaataacaagctttatgaa
gaagtacgaattccctacagtgaacctatgccaattggctttgaggaaaagccagtttac
atccaagacttagatgagattggacaattagcttttaaaggaatgaagagactcaataga
atccagtcaatagtgtttgaaactgcctacaacaccaatgagaacatgctgatttgtgcc
cctactggagctggaaagaccaacattgcaatgttgacagttttgcatgaaattcgccaa
cattaccaacaaggtgttattaaaaaaaatgaatttaagattgtatatgtcgctccaatg
aaagccttggcagctgaaatgacaaattacttcagcaaacgtctagaaccactgggcatc
gtggtgaaagaattgactggtgatatgcaattgtcaaaaaatgaaattttacgaactcag
atgcttgtaaccacaccagaaaaatgggatgtagtaacaagaaagagtgttggagacgtt
gcgctttcccaaattgtgaagcttcttattcttgatgaggtacatttgctgcatgaagat
agagggccggttttagaaagcatagttgcacgtactttacgacaggttgagtctacacag
agtatgataaggattcttggattgtctgcaaccttacccaactaccttgatgttgctaca
tttttacatgtcaatccctacattggacttttctattttgatggccgttttcgaccagta
cctcttggacagacttttttgggaattaagagtgcaaataagatgcaacaattgaataac
atggatgaagtttgttatgaaagtgttttgaagcaagtcaaatctggacaccaggtgatg
gtgtttgtacatgctcggaatgccactgtaaggacagctatgtctctaatagaaagagca
aaaaattgtggccagatttcttgctttttacccacccaaggacctgaatatggacatgca
gaaaaacaggtacagaagtcaagaaataagcaagttcgagaattattcccagatggtttt
agtattcatcatgcaggaatgcttcggcaggacagaaatttagtggaaaacttgttttct
aatgggcatatcaaagtcctggtctgcactgccacgttagcctggggtgtcaatcttcct
gctcatgctgttattattaagggaacacaaatatatgctgcaaaaagaggctcctttgtt
gaccttggaattttagatgtcatgcagatatttggccgagctggaagaccacaatttgac
aaatttggtgaaggaatcattataacaacacatgataaactcagccactacctgactttg
ctcactcaacaaaacccaattgagagtcagtttctggaaagccttgcagacaacctaaat
gcagagattgctctgggaactgtcactaatgtggaagaggcagtgaagtggataagttac
acttacctctatgtgcggatgagagcaaatccattagtatatggcatcagtcacaaagct
tatcagattgacccaacattaagaaagcatcgagaacagttagtcattgaagtaggacga
aaactagacaaagctcagatgatccgctatgaagaaagaacaggatatttttcttcaact
gatttgggtagaactgccagccactattacattaaatacaacaccattgagacttttaat
gaactctttgatgctcacaaaacagaaggtgacatatttgccattgtttccaaagctgaa
gaatttgatcaaattaaggtcagagaagaggaaatagaggaactagatgccttattaaac
aatttctgtgaactatcagctcctggaggtgtagaaaatagttatgggaaaataaacatc
ttactgcaaacttacatcagccgaggagagatggacagtttctcactcatttcagattca
gcatatgttgcacagaatgcagctagaattgtccgtgctctttttgaaattgctctgagg
aaacgctggcctaccatgacctacaggctcctgaatcttagtaaagtcatcgacaagaga
ctttggggttgggctagtcctttgagacaattttcagtgttgccaccacacattctaaca
agattagaagagaaaaagcttactgtagataagctgaaagatatgagaaaagatgaaata
ggtcacattttgcatcatgtgaatattggactgaaagtcaagcagtgtgttcatcagatt
ccctctgttacaatggaggcatccattcagcccatcacgcggactgttctccgagtgaca
ctcagtgtcagccctgatttcacttggaatgatcaggtccatggaacagtaggagaaccc
tggtggatttgggtagaagatcctacaaatgatcatatttatcattcagagtattttcta
gctcttaaaaaacaggtcattaataaggaacctcaactactggtatttacaattcctatt
tttgagccgttgccttcccaatactacattcgagcagtgtctgatagatggttaggagct
gaggctgtttgtattatcaactttcaacatctgattctaccagagagacatcctccccat
acagaattactggatcttcagcctttgccaatcacagctttgggatgcaaagcatatgag
gccctgtataatttcagccactttaaccctgtgcagacacagatatttcatacactgtat
catacagactgtaatgtcctacttggagcacccactgggtcgggaaagactgttgcagct
gaacttgccattttcagagtcttcaacaattaccccacctcaaaggcagtgtacattgcg
cccttaaaagcccttgtacgtgaaagaatggatgactggaaaattagaatagaagagaaa
cttggtaaaaaagttattgagctaacaggagatgtaactcctgatatgaaatccattgcc
aaggctgaccttattgtcactacacctgagaagtgggatggagtcagtagaagctggcaa
aacaggagctatgttaagcaagtcactattctcatcatagatgagatccatttgcttggg
gaagaaagaggtcctgttctagaagtcatcgtatctcgaacaaatttcatctcatcacac
acagaaagacctgttagaatagttgggctgtctactgcattagctaatgccagagatctt
gctgactggcttaatattaagcagatgggcttgttcaacttccgaccatcagtacgtcct
gttcctctagaagtgcatattcaaggcttcccaggtcaacattactgtcctcgcatggct
agtatgaacaagcctgcatttcaggcaatcagaagtcactctccagccaaacctgtttta
atatttgtgtcatctagacgtcaaactcgacttactgctttagagttgatagcctttctg
gctactgaagaagatccaaagcagtggttgaatatggatgaaagagagatggaaaacatc
attggaacagtaagagattccaacctaaagctgacacttgcttttggaataggaatgcac
catgctgggctacatgaaagggaccgaaaaacagtggaggaactgtttgtgaactgtaaa
gttcaggttctgattgctacaagcacattagcctggggtgtaaattttccagctcattta
gtaattataaaaggaactgaatattatgatggaaaaacaagacgctatgtggattttccc
attacagatgtactgcagatgatggggcgggctgggaggcctcagtttgatgaccaaggc
aaagctgtaattctggttcatgatataaaaaaagacttctacaaaaaatttctttatgaa
cctttcccagtagaatcaagcttgctaggagtgctctcagaccacttaaatgcagagatt
gctggtggcacaataacgtctaagcaggatgcaatggattatatcacatggacttacttt
tttcgacgtcttattatgaaccctagttactacaatttgggtgatgtgagccatgaatct
gtgaataagttcctatctcaccttattgagaagtccctggttgaattggaactttcctac
tgtattgaaattgcagaggataatcggagcattgagcctctgacatttggccgaattgcg
tcctattactatttgaagcaccagacagttaaaatgttcaaggaccgtttgaaacctgaa
agcagtactgaagaattgctttcaattctgagtgatgcagaagaatatacagatttgcca
gtaagacacaatgaagaccatatgaacagtgaactagcaaaatgtcttcccattgaagta
aatcctcactcatttgacagtcctcatacaaaagcacatctcctgctacaggcacatctt
agccgagccatgctgccctgcccagattacgacactgataccaaaactgtcttggaccaa
gctctaagagtatgtcaggcaatgctagatgtcgctgcaaaccagggctggctggtgact
gctctgaatatcacccacctggtgcagatggtgatccaaggccggtggttaaaagactct
gatcttcttacactaccaaacatagagcagcaccatcttcaccttttcaggaaatggaat
ccagccacaaagggcccacacgctaagtgccgaacctccattgagtgccttcccgaacta
atccatgcctgtggagggaaagaccacgtattcagttccatggtagagaaggagctacag
gctgcaaaaacaaagcaggcgtggaatttcttatctcgactgccagtgataaatgttggc
ataagtgtaaaaggctcatgggatgacttagctgaagggcagcatgaactccctgtctca
actctgactgcagacaaacgagatgacaacaaatggatcagattgcatgctgaccaggag
tatgtgcttcaagtcagcttacagagagcccactttgggttccacaagggaaagcaggag
agctgtgcagttgcccctcgatttcccaaatcaaaagatgaaggatggtttttgatacta
ggagaagtggataagagagagcttattgctttaaaacgaataggatatgttcgaagtcac
caggacatttccatttctttttatacccctgaaatacctggaaggtatatcttcactctg
tatctcatgagtgactgctatattggcctggaccaacagtatgacatttatctcaatgtc
acacaagcaagcatttccacacaggtcgacacagaggtctcagaagccttcactgacctg
gcattgaagtaa
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integrated database retrieval system
