Perognathus longimembris pacificus (Pacific pocket mouse): 125357195
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Entry
125357195 CDS
T08928
Symbol
Lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop05143
African trypanosomiasis
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125357195 (Lama4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125357195 (Lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125357195 (Lama4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125357195 (Lama4)
09162 Cancer: specific types
05222 Small cell lung cancer
125357195 (Lama4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125357195 (Lama4)
09174 Infectious disease: parasitic
05146 Amoebiasis
125357195 (Lama4)
05145 Toxoplasmosis
125357195 (Lama4)
05143 African trypanosomiasis
125357195 (Lama4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_LMN_ATRN
EGF_laminin
Laminin_G_3
BORCS6
COG3_N
KIF21A
Med9
Motif
Other DBs
NCBI-GeneID:
125357195
NCBI-ProteinID:
XP_048209889
LinkDB
All DBs
Position
9:complement(35010875..35156056)
Genome browser
AA seq
1824 aa
AA seq
DB search
MAVSSAWWCSILPLWLLWGAAYSSAASGDDTPFAFDMEGSSPVGRQDLPETSEPHVTSRS
PPPVVQRCDTGYFRALSGECLPCDCNDNSNECLDGFGFCVHCQRNTTGEHCEKCLDGYIG
DSIRGVPRFCLPCPCPLPNLANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLL
MGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYFGDARTAKNCA
VCNCGGGPCDSVTGECLEEGFELPTGTDCPTISCDKCIWDLTDDLRLAALSIEESKSGLL
SVSSGAAAHRHVNEMNSTIYLLKTKLSERENQYTLRKIQINNAENTMKSLLSDLEELTRK
GNQASSKGKHVQKESKDTTDHATQLVEQAHNMRDKIQEINKKMLYYEEEQELGPEEVAEK
LVLAQKMVEEIRSYPSFLMQRELVDEEADEAQDLLSHVENWQRLHNDTRSFFPVILEQLD
DYRTKLSDLQESLDQALDHVRDAEDMNRAIASRQRDHEKQRGRVQEQVELVNMTLSASAE
ALSTPQLTLVELDDIIKNVSGIYAEIDGAKNELQGKLSNLSNLSHDLVQEAIDHAHNLQE
EADELIRRLHSSDMNGLVQKALDASNVYENIASYVDEASEKAEFALNITERIYDAVSGID
TQIIYHRDESDNLLNQARDLQDQADISNEAAVADTSRRVSGALSRKDILKNILNDAVRRL
QAAERGDAQLRLGQSKLVIEEANKATREVQRVTGPMAGNLTDWSQNLQSFDSSAYNTAVD
SARDAVRNLTEVVPQLLDQLRTVEQKRPASNVSASIQRIRELIAQTRSVANKIQVSMMFD
GQSAVEVHPKTRMDDLKAFTSLSLYMKPPVKQPDMAEISDQFVLYLGSKSAKKQYMGLAI
KNDNLMYVYNLGTKDVEIPLDSKPVSSWPAYFSIVKIERIGKHGKVFLTVPSLSSTAEEK
FIKKGTFAGNNSLLDLSPEDTVFYVGGVPSNFKLPPSLNLPGFAGCLELATLNNDVISLY
NFKHIYHMDPSKSVPCARNKLAFTQSRAASYFFDGSSYAVVRDITRRGKFGQVTRFDIEV
RTPADHGLVLLMVNGSMFFSLEMHNGYLHVFYDFGFSNGPVHLEDTLKKAQINDAKYHEI
SIIYHNDKKMILVVDRRHVKSMDNEKMKIPFTDIYIGGAPPEILHSRTLRAHSLLDVNFR
GCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQSFISSVQKISFFDGFEG
GFSFQTLQPNGLLFYYASGSDVFSISLDNGTVIMDVKGIKVQLAEKQLNDGLAHFIIASV
SPTRYELIVDQNRLVNKNLTKGKAEPSPAGEKKYYFGGSPISPQYANFTGCISNAYFARL
DRDVEVEDFQQYSEKVHTSLSECPVETSPLFLLHKKGKNSSKPKSSQNGKGEKIKDGPSW
DPVGLKFLEQNAPKDSHCHLSNRPRAIEHAYQYGGTANSRQEFEHLKGDFGEKSQFSIRL
KTRSSHGMIFYVSDQEENDFMTLFLAHGRLVFMFNVGHKKLKIRSQEKYNDGLWHDVIFV
REKSSGRLVIDGLRVLEENLPPTRAAWKIKGPIYLGGVAPGRAVKNVQINSVYSFSGCLS
NLQLNGASITSASQTFSVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPR
SSSGTLVHGHSVNGEYLNIHMKNGQVIVKVNNGVRDFSTSVTPKQSLCDGRWHRITVIRD
SNVVQLDVDSEVNHVVGPLNPKSADHREPVFVGGVPESLLTPHLAPGKPFTGCIRHFVID
GRPVSFSKAALVSGAVSINSCPAA
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagctcagcttggtggtgctccatcctgcccctgtggctcctctggggtgct
gcctactccagcgctgcgtcgggagacgacaccccgtttgcttttgacatggaagggagc
tccccggtgggcaggcaagacctacctgagaccagtgagccacatgtgacatccagaagc
ccaccgcctgtggtccagagatgtgataccggctacttccgggccttgtcaggagagtgt
ttaccctgtgactgcaacgataattccaatgaatgcttggatggcttcggattctgtgtg
cactgccagaggaacacaacaggggagcactgtgaaaaatgcctggatggctatatcgga
gattccatcaggggtgtgcctcgattctgcctgccctgcccctgtcccttgcccaacctg
gccaattttgcagaatcctgctataggaaaaatggagctgttcggtgtatctgtaaagaa
aattatgctggacctaactgtgaaagatgtgctcctggttactatggaaaccccttactc
atgggaagcacctgtaagaaatgtgactgcagtggaaattcagatcctaacctgatcttt
gaagactgtgatgaagtcactggccagtgtaggaattgcttacgcaacaccacaggattc
aagtgtgaacgctgtgcccctggctactttggggatgccaggacagccaagaactgtgca
gtgtgcaactgtggtggtggcccatgtgacagtgtaacaggagaatgcttggaagaaggt
tttgaactccctacaggcacggactgcccaaccataagctgtgataagtgcatctgggac
ctgacggatgatctcaggttagcagcactctccattgaagaaagcaaatctgggctgctg
agcgtgtcctccggcgctgctgcacataggcatgtgaatgaaatgaactccaccatctac
ctcctcaaaacaaaattgtcagaaagagaaaatcagtacaccctaaggaagatacaaatc
aacaatgctgagaacacaatgaaaagcctgctgtctgatctggaagaattaactagaaag
ggaaatcaagcctcaagtaaggggaaacatgttcagaaggagagtaaggataccactgac
catgcaactcaacttgtagaacaagcccacaatatgagggataaaatccaagagatcaac
aagaagatgctctattatgaggaggagcaggaacttggccctgaggaagtcgctgagaag
ctggtgttggctcagaagatggtggaggagattagaagctatccatcatttctcatgcag
agagaacttgtggatgaggaagctgatgaggcccaagatttgctgagccatgttgagaac
tggcagagactacacaatgatactcgctctttctttcctgtcatcttggagcaattggat
gactacagaactaagctgtcagacctccaggaatcacttgaccaagcccttgaccatgtc
agggatgctgaagacatgaacagagccatagcctccaggcagcgagaccatgagaaacaa
cgagggagagtgcaggaacaggtggaactggtaaacatgactctgagtgcatctgctgaa
gctctgtcaacccctcagctgacccttgtggagcttgatgacataataaagaatgtatca
ggaatttatgcagaaatagatggagccaaaaatgaactacaaggaaaattatctaaccta
agtaacctcagtcatgatttagtccaagaagctattgaccacgcccacaaccttcaggaa
gaagctgatgagctgatcagacgtttgcacagctcagatatgaatgggctggtgcagaaa
gccttggatgcatcaaatgtctatgaaaatattgccagttatgttgatgaagccagtgaa
aaggcagaatttgctttgaatatcactgagcgaatttatgacgctgtgagtgggattgat
actcagatcatttaccatagagatgaaagtgacaaccttctcaatcaagccagagacctg
caagaccaagcagatatcagcaatgaggcagctgtagctgacaccagcaggcgtgtgagt
ggagctctctcaagaaaggacatccttaaaaacatactaaatgatgccgtgaggagactc
caggcagcagaaagaggtgatgctcagctacgccttggtcagtccaagttggtcatcgag
gaggctaacaaggcgacgagggaggtccaacgagttactggtcccatggctggcaatctc
accgactggtcacagaatcttcaaagttttgactcttcagcttataacactgccgtggac
tctgctagagatgcagtaagaaatctgacagaagtggtccctcagctcttggatcagctt
cgtactgttgagcagaagcggcctgcaagcaatgtttctgccagcatccagaggatccgg
gagctcattgctcagaccagaagtgttgccaacaagatccaagtctccatgatgtttgat
ggccagtcagctgttgaagtgcaccccaaaaccagaatggatgacttaaaggccttcaca
tccctcagtctgtatatgaagcctcccgtgaagcagccagacatggctgagatctcagat
cagtttgttctctacctcggaagcaaaagtgccaaaaaacaatacatgggccttgcaata
aaaaatgataacctgatgtatgtctataacttggggactaaggatgtggagattcccctg
gactccaaacctgtcagttcctggcctgcttactttagcattgtcaagattgaaaggata
gggaaacacggaaaggtgtttttgacagtcccaagtctcagtagcacagcagaggaaaag
tttattaaaaaggggacatttgcaggaaacaactccttgctggacctgagtcctgaggac
acagtgttttatgttggaggagtaccttcaaacttcaagctgcctcccagcttaaacctg
cctggctttgctggctgcctggagctggccactttgaataatgatgtgatcagcttgtac
aactttaagcacatctatcacatggatccctccaagtcagttccctgtgccagaaataaa
ctggcctttactcagagtcgagctgccagttacttctttgatggctccagttatgctgtg
gtgagggacatcacaaggagagggaaatttggtcaggtgactcgctttgacatagaagtc
cgaaccccagctgatcatggccttgtgctcctgatggtcaatggaagcatgtttttcagc
ctggaaatgcacaatggttacttacatgtgttctatgactttggattcagcaatggccct
gtccatcttgaagacacgttgaagaaagcccagattaatgatgcaaaataccatgagatc
tcaatcatttaccacaatgacaagaaaatgattttggtagttgacagacgccatgtcaag
agtatggataatgaaaagatgaaaatacccttcacagatatatacattggaggtgctcct
cctgaaattttacactcaaggaccctaagagcacactctctcctggatgtaaacttcaga
ggatgcatgaagggtttccagttccaaaaaaaagatttcaatttactggagcagacagaa
accttgggagttggttatggatgcccagaagactctcttatttctcgcagagcatatttc
aatgggcaaagcttcatttcttcagttcagaaaatatctttcttcgatggcttcgaagga
ggctttagcttccaaacattacagccaaatggcttactattctattatgcttcagggtct
gatgtgttttccatttcactggacaatgggactgtcatcatggatgtgaaggggatcaag
gtccagttggcagaaaagcaactgaatgatgggctggcccacttcatcatcgcttctgtc
tcacccacaagatatgagctgatagtagatcaaaacagacttgtgaataagaatcttacc
aaagggaaagcagaaccgtctccagcaggagagaagaagtattactttggtggctctccc
atcagtccccagtatgctaatttcaccggctgtataagtaatgcctactttgccaggttg
gatagagatgtggaggtagaagatttccagcagtactctgaaaaggtccatacttctctc
tccgagtgtcccgtggagacttcaccattgtttctccttcacaaaaaaggaaaaaattcc
tcaaaacctaagtcaagtcagaatggaaagggagagaaaattaaagatggaccttcatgg
gatcctgttggcctgaaatttctagaacagaatgctcccaaagattcccactgccacctc
tccaacaggccaagagcaatagagcacgcctatcaatatggagggacagccaacagccgc
caagagtttgaacacttaaaaggagactttggtgaaaaatctcaattttccattcgtctc
aaaactcgttcctcccatgggatgattttctacgtctcagatcaagaagagaatgacttc
atgacactcttcctggcccatggtcgcttggttttcatgtttaatgttggccacaagaaa
ctgaagattagaagccaagagaaatacaatgatggcttgtggcatgatgtgatatttgtt
cgagaaaagagcagtggccggctggtcatagatggtctgagagtcctggaagaaaatctt
cctcccactagagctgcctggaaaatcaaaggtccgatttatttgggaggagtggctcct
ggaagagctgtgaaaaatgtccagattaactcagtctacagtttcagtggctgtctcagc
aatctccagctgaatggggcctccatcacctctgcctctcaaacattcagtgtgacccct
tgctttgaaggtcccatggagactggcacttacttttcaacagaaggaggatatgtggtt
ctagatgagtccttcaacattggcttgaagtttgaaattgcatttgaagttcgtcccaga
agcagttctggaacccttgtccatggccacagtgtcaatggggaatacctaaatatccac
atgaaaaatgggcaggtcatagtaaaagtcaacaatggtgtcagagacttttctacctca
gtaacacccaagcagagtctctgtgatggtagatggcacagaattacagttattagagat
tcaaatgtggttcagttggatgtagactctgaagtaaaccatgtggttggaccgctgaat
ccgaagtcagctgatcatagggagcctgtgtttgttggaggtgttccagagtctctactg
acaccacacttggccccaggcaaacccttcaccggttgtatccgccactttgtgattgat
gggcgccctgtcagtttcagtaaagcagccttggtcagcggtgctgtgagcatcaactct
tgtcccgctgcctga
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integrated database retrieval system
