Perognathus longimembris pacificus (Pacific pocket mouse): 125357380
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Entry
125357380 CDS
T08928
Symbol
Stxbp5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125357380 (Stxbp5)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125357380 (Stxbp5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125357380 (Stxbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Lgl_C
Beta-prop_RSE1_2nd
EIF3I
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_2nd
Synaptobrevin
WD40_Gbeta
Beta-prop_Aladin
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
125357380
NCBI-ProteinID:
XP_048210210
LinkDB
All DBs
Position
9:60795347..60895245
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AA seq
1153 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSASASQQQPPPAQPQHPSGNREPEIQETLQSEHFQLCKTVRHGF
PYQPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSA
LADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNVESFTL
SGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVALWDLKSKKADYRYTY
DEAIHSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPIL
KVEFKTTRSGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYP
NDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPAL
YSVGARQKRQGYSKKEWPISGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKL
KTSKVFEKSRNKDDRPSTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVI
TEVIPMLEVRLLYEINDMETPESEQPPPLSTPVGGSNPIPPQSHPSTSSSSSDGLRDNVP
CLKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSSYGLVVFGNCNGIAMVDYL
QKTVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDITEGTVIPEDRCKSPTSGSS
SPHNSDDEQKMNNFIEKVKTKSRKFSKMVASDIAKMSRKLSLPTDLKPDLDVKDNSFSRS
RSSSVTSIDKESREAISALHFCETYTRKADSAPCPCLWVGTTLGTVLVIALNLPPGGEQR
LLQPVIVSPSGTILRLKGAILRMAFLDATGCLIPPAYEPWKEHNVPEEKDEKEKLKKRRP
VSVSPSSSQEISENQYAVICSEKQAKVITLPSQNCAYKQNITETSFVLRGDIVTLSNSIC
LACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTY
SQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLA
QHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLSDLEERTAAMLSSADSFSKHAHE
MMLKYKDKKWYQF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaattcaacattcggaaggtgctggacggcctgaccgccggctcggcctcggcc
tcgcagcagcagccgccgccggcgcagccgcagcacccgtccgggaaccgggagcccgag
atccaggagacgctccagtccgagcacttccagctctgcaagactgttcgccatggattc
ccctaccagccctcagccctggcctttgatcctgtgcagaagatcctggcagtaggaact
cagactggtgctttaaggctctttggtcgtccaggagtagaatgttactgccagcatgac
agtggagctgcagtgatccagctccagttcctgattaatgagggagcacttgtgagtgcc
ttggctgatgacaccttacacttatggaatctacgtcaaaaaaggcctgccatactacat
tcacttaaattttgcagagaaagggttaccttttgccatctgcctttccagagtaagtgg
ctctatgtgggcacagaacgaggtaatattcacatcgtcaatgtggagtccttcacactc
tcaggctacgtcattatgtggaataaagccattgaactgtcatctaaatcccatccagga
cctgttgtccatataagtgataatccaatggatgaaggaaagcttttgattggctttgaa
tctggaacagtagccttatgggacctcaagtcaaagaaagcggactacagatatacatat
gatgaggctattcactctgtggcctggcaccatgaaggaaagcagtttatttgcagtcat
tcagatggcactttgaccatatggaatgtgaggtcacctgccaaacctgtgcagacaatc
actccgcatggaaaacagttaaaagatgggaagaagccagagccatgtaaacctatcctc
aaggtggaattcaaaacgactcgatctggggaaccttttattattttatcaggaggttta
tcatatgatactgtaggaagaagaccttgcttaacagtgatgcatgggaaaagtacagct
gtgctggaaatggactattcaattgttgatttcctaacactttgtgaaactccatacccc
aatgatttccaggaaccatatgctgtggttgttcttctagaaaaggatttagtactaata
gaccttgcacagaatggatatcctatatttgaaaatccttaccctttgagtatacatgaa
tcccctgttacatgttgtgaatattttgctgactgtcctgtggaccttattcctgcactt
tattctgttggagctagacagaaacgtcaaggttacagcaaaaaggaatggcccattagt
ggaggtaattggggcttgggtgctcaaagttacccagaaataattatcacagggcatgct
gacgggtcagttaaattctgggatgcttctgcaataacattacaagtactatataaacta
aaaacatctaaagtatttgaaaagtcaagaaacaaagacgacagaccaagcacagacatt
gttgatgaagatccatatgccattcagatcatctcctggtgcccagagagtagaatgctg
tgcatagctggagtttcagctcatgtcattatttatagattcagcaagcaggaagtgatt
actgaagtcattccgatgcttgaggtccgattgttatatgaaataaatgacatggaaact
ccagagagtgagcagccaccacccttgtcaacacctgtaggagggtccaatcccattccc
cctcagtcgcatccgtctaccagtagcagttcatccgatgggcttcgtgacaatgttcct
tgtttaaaagttaaaaattcaccacttaaacagtctccaggctaccagacagaactagtt
attcagttggtatgggtaggtggagaaccaccacaacaaatcacgagcctggcagtcaat
tcttcctatggacttgtggtttttggcaactgcaatggcattgctatggttgactacctg
cagaaaacagtcttactgaacctggggactatcgagttatatggctcaaatgatccttac
cggagagaacctcggtctcctcgtaaatctcgacaaccttctggagcaggtctgtgcgat
attactgaagggacggtcatcccagaggatcgctgcaaatctccaacttctggttcttca
tcaccacacaattcagatgatgaacaaaaaatgaataattttatagaaaaggtgaagacc
aaaagcagaaagttttccaagatggtagccagtgatatagcaaagatgtcgaggaagtta
agtttgccaactgatctaaagcctgatttagatgtaaaggataattccttcagcagatca
cggagttcaagtgtaaccagcatcgacaaagaatcccgagaagccatttccgctcttcat
ttctgtgaaacttatactcgaaaggcagactccgctccatgcccatgtctttgggttgga
acaacactaggaacagtgctggtcattgccctgaaccttcccccaggaggagaacaaaga
cttctgcagccagtgattgtgtctccaagtggtactatattgagactaaaaggtgcaatc
ttgaggatggcctttctggatgccacaggctgcttaataccacctgcctatgaaccctgg
aaagaacacaatgttcctgaagaaaaagatgagaaggagaaattgaaaaagcggcgacct
gtttcagtatccccttcctcttctcaggaaattagtgaaaaccagtatgcagtgatatgt
tctgaaaagcaggcaaaagtgatcacactgccatcacaaaactgtgcttataagcagaac
attactgaaacctcgttcgtactacgaggagatattgtaacattgagcaacagcatctgc
cttgcgtgtttctgtgcaaatggtcatattatgactttcagtttgccaagtttaagacct
ctgttggatgtgtattacttaccccttaccaatatgcggatagccagaacattctgcttc
accaacaatggacaagcattatatcttgtttcacccacggaaatccagaggcttacgtat
agtcaggagacatgtgaaaatctccaggagatgttgggtgaactcttcactcctgtggaa
acacctgaggcacccaacagggggttctttaaaggcctgtttggaggtggtgctcagtct
cttgacagagaagaactatttggagagtcatcctctgggaaggcttcaaggagtcttgca
cagcacatccctggtcctggtggcatagaaggggtgaaaggagcagcatccggagttgtc
ggagaattagcaagagccaggttggcactggatgaaagagggcagaaacttagtgacttg
gaagaaagaactgcagctatgttatcaagtgcagattcattttctaaacatgctcatgag
atgatgttgaaatacaaagataagaagtggtaccagttctga
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integrated database retrieval system
