Perognathus longimembris pacificus (Pacific pocket mouse): 125357497
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Entry
125357497 CDS
T08928
Symbol
Thbs2
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04820
Cytoskeleton in muscle cells
plop05144
Malaria
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125357497 (Thbs2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125357497 (Thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125357497 (Thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125357497 (Thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125357497 (Thbs2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125357497 (Thbs2)
09174 Infectious disease: parasitic
05144 Malaria
125357497 (Thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125357497 (Thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125357497 (Thbs2)
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125357497 (Thbs2)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Opsonins
125357497 (Thbs2)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125357497 (Thbs2)
Exosomal proteins of colorectal cancer cells
125357497 (Thbs2)
Exosomal proteins of bladder cancer cells
125357497 (Thbs2)
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125357497 (Thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
EGF
TSP1_CFP_C
Laminin_G_3
TSP1_ADAMTS
cEGF
Motif
Other DBs
NCBI-GeneID:
125357497
NCBI-ProteinID:
XP_048210415
LinkDB
All DBs
Position
9:complement(72731572..72772043)
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AA seq
1172 aa
AA seq
DB search
MLWRLVLLALCVWPRAQAADPDAEATFDLFSLSNINRKTIGAKQFRGPEPGAPAYRFVRF
DYIPPVSADGLGRILEAMRRKDGFFLAAQLKQDPRSRGTLLALEGPGAAGRRFALVSDGP
RDALDLAFRAGGAQHVLSLEDVGLADARWKNVTVQVAGDAFSLYVGCDLVDSVALDEPFY
EQLPADGSRMYVARGASRESHFRGLLQNVHLVFENSVEEVLSRKGCHRGLEAEANAISEH
TETLHLSPHLXTDFVGHGVQKRPEVCTHSCEELSNMMNELSGLHLMVNQLSKNLERVSDD
NQFLLELIGGPLKTRNMSGCLQDGRFFAENETWVIDSCTSCTCKKFKTICHQISCPXANC
ATPSFIEGECCPSCSHSGAGEEGWSPWAEWTQCSVTCGSGTQQRGRSCDVTSNTCRGASI
QTRACALDKCDTRIRQNGGWSHWSPWSSCSATCGEGNVTRIRLCNSPVPQMGGRSCKGSG
RETKPCQGTPCPVDGRWSPWSPWSACTVTCAGGIRERARVCNSPEPQHGGRDCVGDMKEH
QMCNKRSCPIDGCLSNPCFPGAECNSFSDGSWSCGSCPAGFLGNGTHCEDLDECAVVTDI
CFSTSKASRCVNTLPGFHCLPCPPRYKGSQPFGVGLEAARTEKQVCEPENPCKDKTHNCH
KHAECIYLGHFSDPMFKCECQTGYAGDGLICGEDSDLDGWPNNNLVCATNATYHCIKDNC
PRLPNSGQEDFDKDGIGDACDEDDDNDGVSDEKDNCQLLFNPRQFDYDKDEVGDRCDNCP
YVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDSDGVGDHCDNCPL
MHNPDQTDADNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDDDGQGDACDSDD
DNDGVPDDRDNCRLVFNPGQEDADGDGRGDICKEDFDNDSVPDIDDVCPENNAISETDFR
NFQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDR
DDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPSRAYGYSGVSLKVVNSTTGAGEHLRN
ALWHTGNTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGYMRVLVHEGKQVMADSGPI
YDHTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgctctggaggctggtcctgctggccctgtgtgtgtggccgcgtgctcaagccgccgac
ccggacgcggaggcgaccttcgacctcttcagcctcagcaacatcaaccggaagaccatc
ggcgccaagcagttccgggggcccgagcccggcgcgcccgcctaccgcttcgtccgcttc
gactacatccccccggtgagcgcggacgggctgggccggatcctggaggccatgcggcgg
aaggacggcttcttcctggcggcgcagctgaagcaggacccgcggtcccgcggcacgctg
ctggccctggagggccccggcgcggcggggcggcgcttcgcgctcgtgtcggacgggccg
cgcgacgcgctggacctggccttccgcgcgggcggcgcgcagcacgtgctctcgctggag
gacgtgggcctggccgacgcgcgctggaagaacgtcaccgtgcaggtggccggcgacgcc
ttcagcctgtacgtgggctgcgacctggtggacagcgtcgccctggacgagcccttctac
gagcagctgcccgccgacggcagccgcatgtacgtggcccgcggcgcctcgcgggagagc
cacttcaggggtttgctgcagaatgtccacttagtgtttgaaaactccgtggaagaggtt
ctaagcaggaaaggctgccaccgaggcctggaagctgaagccaatgctatcagtgagcac
acggagacactgcacctgagccctcacctcnacacggactttgtcggccatggtgtgcag
aagaggcctgaggtgtgcacacactcctgtgaggagctgagcaacatgatgaacgagctt
tctgggctgcatctgatggtgaaccagctcagcaagaacctggagagagtgtcggatgac
aaccagtttctcctggagcttatcggtggtcccctgaagaccaggaacatgtcaggctgc
ttacaggatggtcggttctttgcagaaaatgaaacctgggtgatagacagctgtacgtca
tgcacctgcaagaaatttaaaaccatctgccaccaaatctcatgcccancagcaaactgc
gccaccccatccttcattgaaggcgaatgctgcccttcctgttctcactcgggcgcgggc
gaggagggctggtctccgtgggccgagtggacccagtgctccgtcacctgcggctccggc
acgcagcagcggggccggtcctgcgatgtcaccagcaacacctgccggggcgcctccatc
cagacgcgggcctgcgccctggacaagtgtgacacccgcatccgtcagaacggcggctgg
agccactggtcgccgtggtcctcgtgctcagcgacctgcggcgagggcaacgtcactcgc
atccgcctctgcaattcacccgtgccccagatgggcggcaggagctgcaagggcagtggc
cgggagaccaagccctgccagggcacgccgtgccccgtcgacggccgctggagcccctgg
tctccatggtcagcctgcacggtcacctgtgcgggaggaatccgggagcgggccagggtc
tgcaacagccctgagccccagcacggcgggagggactgcgtgggagacatgaaggagcac
cagatgtgcaacaagaggagctgccccatagatggctgcttgtccaacccctgctttcct
ggagcagagtgcaacagcttttctgatggctcgtggtcctgcggctcatgccctgcgggc
ttcctaggcaatggcactcactgcgaggacctggatgagtgtgctgtggtcacggatatt
tgcttctctaccagcaaagcttcccgctgcgtcaacaccctgcccggcttccactgtctg
ccctgccccccacgctacaaggggagccagcccttcggggttggcctggaggctgccagg
acagaaaagcaggtgtgtgaacctgaaaacccatgcaaggacaagactcacaactgccac
aagcatgcagagtgcatctacctgggtcacttcagcgatcctatgttcaagtgtgagtgc
cagacaggctacgcaggcgatgggctcatctgcggggaggactcggacctggatggctgg
cccaacaacaacctggtgtgtgccaccaacgctacctaccactgcatcaaggataactgt
ccccggctgcccaactctgggcaggaggatttcgacaaggatggaattggtgatgcctgt
gatgaggacgatgacaacgacggcgtgagcgacgagaaggacaactgccagctcctcttc
aacccccgccagtttgactatgacaaggatgaggttggggaccgctgtgacaactgtccc
tacgtgcacaaccccgcgcagatcgacaccgacaacaacggtgaaggcgacgcctgctcg
gtggacatagacggggacgatgttttcaatgaaagagacaactgtccttatgtctataat
acggaccagagggacaccgacagcgatggcgttggggaccactgtgacaactgcccgctg
atgcacaacccagaccagacagacgcggacaatgacctcgtcggggaccagtgtgacaac
aatgaggacatagacgatgacggtcaccagaacaaccaggacaactgcccctacatctcc
aacgccaaccaggccgaccacgacgacgacggccagggcgacgcctgcgactccgacgac
gacaacgacggcgtccccgacgacagggacaactgccggctggtgttcaacccgggccag
gaggacgccgacggtgacgggcggggtgatatctgcaaggaggattttgacaatgacagc
gtccctgacatcgatgacgtgtgcccggagaacaacgccatcagtgagacagacttcagg
aacttccagatggtccccttggacccaaagggaaccacacagatcgatcccaactgggtc
attcgccaccagggaaaggagctggtccagacggcgaactcagacccgggcattgctgta
ggttttgatgagtttgggtctgtggacttcagcggcacattctacgtcaacactgaccgg
gacgacgactacgctggcttcgtctttggctatcagtccagcagccgcttctacgtggta
atgtggaagcaggtcacgcagacctactgggaagaccagcccagcagggcctacggctac
tcgggggtgtccctcaaggtggtgaactccacgaccggcgcgggagagcacctgcgcaat
gccctgtggcacacggggaacacggaggggcaggtgcgcacactgtggcatgaccccaaa
aacatcggctggaaagactacactgcctacaggtggcatctgatccacaggcccaagact
ggctacatgagggtcctggtgcacgagggaaagcaggtcatggcggactcaggaccaatc
tatgaccacacctatgccggtggacgtttgggtctctttgtcttctctcaagaaatggtg
tacttctctgacctcaagtatgaatgcagagatgtctag
DBGET
integrated database retrieval system
