Perognathus longimembris pacificus (Pacific pocket mouse): 125357710
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Entry
125357710 CDS
T08928
Symbol
Prdm13
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125357710 (Prdm13)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125357710 (Prdm13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
C2CH-3rd_BIRD-IDD
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125357710
NCBI-ProteinID:
XP_048210607
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Position
9:complement(17925025..17932731)
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AA seq
769 aa
AA seq
DB search
MPSRVTPRAQDARRGAAPSSRARLGLCHSRPVEDWARPRACLAAAATMHGNARTPATSVS
ADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIRA
ARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPITATPTHDEKG
EERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGGRAFLHHEHAARQGAAAPADGLGLSPK
PTAPDFAVPVQAGTLRPQPQAPQLPQTCGARESIKREASSGPPAISPPLGKWGPLKKGKE
QQPDRSVDMSGAARAHHGHFLGIVGGSPAGSGGLAFYPGARSAFKPAGLARAAAHGDPYR
EEGGGKAGAGLALGRLLGGGRAGGRPGSGENPAAGGAGHHHHHHHHAHHHHPKCLIAGDP
PPPPPPPGLPCSGTLRGFPLLPGHPEEGSAFKHVERAPPAATALPGARYAPLPPAPGLPL
ERCALPPLDAGGLKAYPGGECGHLPAAVMPAFTVYNGELLYGSPAATAYYPLKLHFGGLL
KYPESLSYLSGPAAAAAAAAAAAAAAALSPAELGSLASIDREIAMHTQQLSEMAAGKGRG
RLDSATLPPAVVAAGGVGGGGGGGGSGAGKAKTGHLCLYCGKLYSRKYGLKIHMRTHTGY
KPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSL
LAKAGDGQGAEPGYPLEPGDPKSDDSDVDVCFTDDQSDPEAGGRAGPDS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccgcgtcactccgcgggcgcaggacgcacgtcggggcgcggctcctagctcg
cgcgcgcggctcgggctctgtcactcgcgccctgtggaggactgggcgcgtccaagagct
tgcctggcggcggcagcgacgatgcacgggaacgcccgcactccggccaccagcgtgagt
gccgactgctgcatcccggccggcttgcgcctcggcccggtgcctggcaccttcaagctg
ggcaagtacctgtcagatcgcagggagcccgggcccaagaaaaaggtacgcatggtgaga
ggggagctggtggacgagtcggggggctcccctctggagtggatagggttaatccgggca
gccaggaatccccaggaacagactctggaagctatagcagacttacccggaggacagatc
ttctaccgagcattgcgagatgtccagccaggggaagaactgactgtgtggtattcgaat
tccttggctcagtggtttgacattcccatcactgcaactccaactcacgatgagaaaggg
gaggaacgctacatttgctggtactgctggaggacctttaggtaccccaatagtctcaaa
gcacacctgcgattccactgcgtgctcagcggcggcgggggccgcgccttcctgcaccac
gagcacgcagctcgccaaggcgccgcagccccggccgatggccttggcctctccccgaaa
cccactgcacccgacttcgccgtgcccgtccaggcgggcactctgcggcctcaaccacag
gccccacaactcccccagacttgtggggcgcgggaaagcatcaagcgcgaggcctcctcc
gggcccccagccatctcgccgcccctgggcaagtgggggccgctcaagaagggcaaggag
caacagcccgaccgctccgtggacatgagcggggcagcccgggcgcaccacggccacttc
ctgggcatcgtggggggctccccagcggggagcggcggcctggctttctaccccggcgcg
cgctcagctttcaagcccgctggtttggcgcgggcggccgctcacggcgacccctaccgg
gaggagggtggcggcaaagccggggcgggtctagccttgggccggctgctgggcggaggt
cgggctggcgggcgcccggggagtggggagaacccggcagccggaggcgcgggccaccat
caccaccaccaccaccacgcgcatcaccaccaccccaagtgcctgatcgcgggggaccca
ccgccgccgccccctccgcccggcctgccttgctccgggaccctacgcggcttccccctg
ctccctggccacccagaagaggggtccgccttcaagcacgtggagcgcgccccgccggcg
gccaccgcgctgccgggggcgcgctacgccccgctgccgcccgcacccgggctcccgcta
gagcgctgcgctctgccgcccctcgacgcgggcggcctcaaggcctatcccgggggcgag
tgcggccacctgcccgccgccgtcatgcccgccttcaccgtctacaacggggagctgctc
tacggctccccggccgccaccgcgtattacccgctcaaactgcacttcggaggactgctc
aagtaccccgagtccctctcctatctgagcgggcccgcggcggcggcggcggcggcggcg
gcggcagcggcggcggcggccctgagcccggcggagctgggctcgctcgccagcatcgac
cgggagatcgccatgcacacgcagcaactgtccgagatggcggccggcaagggccgcggc
cgtctggattccgccaccttgcccccggccgtggtggcggcgggtggcgttgggggtggc
ggaggcggcgggggcagcggggcaggcaaggccaagaccggccacctgtgcctctactgc
ggcaagttgtactcgcgcaagtacgggctcaagattcacatgcggactcacacgggctac
aagccgctcaagtgcaaagtgtgcctccggccctttggcgaccccagcaatctcaacaag
cacatccggctgcacgccgagggcaacacgccctaccgctgcgagttctgcggcaaggtg
ctggtccgccgccgggacctggagcgccacgtcaagtcccgccacccgggccagagcctg
ctcgccaaggcgggggacggccagggggccgagcccggctatccgctggagcccggggat
cccaaaagcgacgacagcgacgtggacgtctgctttaccgacgaccagagtgaccccgag
gctgggggccgggccgggcccgactcctaa
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