Perognathus longimembris pacificus (Pacific pocket mouse): 125357926
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Entry
125357926 CDS
T08928
Symbol
Rangap1
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125357926 (Rangap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125357926 (Rangap1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125357926 (Rangap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CobT
CPSF100_C
Nop14
RNA_pol_Rpc4
Presenilin
NOA36
Mpp10
BUD22
Nse4-Nse3_bdg
Sigma70_ner
DUF4589
Motif
Other DBs
NCBI-GeneID:
125357926
NCBI-ProteinID:
XP_048210725
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Position
1:5583619..5608926
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AA seq
586 aa
AA seq
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MASEDIAKLAETLAQTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEEFDGLEALRLEGNT
VGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLS
DNAFGPDGVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL
ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINSLLRV
INLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLQELNL
SFCEIKRDAALAVAEAVADKTKLKKLDLNGNALGDDGCKQLREVLDGFHMTKMLASLSDD
EGEDDEEDDDEEEGEDEEEEEEEEEEEEEEEEDEEEEPQQEGQGEESTTPRKILDPNSGE
PAPVLSSPPPTDVPTFLAFPSPEKLLRLGPKGSVLIAQQTDTSDPEKVVCAFLKVASVFK
DEASVRAAVHEAVDALMKKAFGASSFNSNAFLTRLLVHMGLLKSEDKIKAIPNLYGPLMV
LNHVVQQDYFPKALTPLLLAFMTKPNGALESCSFARHNLLQTLYSV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagacatcgccaaactggcagagaccctggcccaaacccaggtggctgga
ggacagctgagttttaagggcaagagcctcaagctgaacactgcagaagatgctaaggat
gtgattaaggaaattgaagagtttgacggcctggaggctctgcgcttggagggcaacacc
gtgggcgtagaagcggccaaggtcatcgccaaggccttagagaagaagtcggagttgaag
cggtgccactggagcgacatgttcaccgggaggctgcggtcggagatcccacccgccctg
atctcactaggggagggtctcatcaccgcgggggctcagctggtggagctggacctgagt
gacaatgctttcgggcctgatggcgtccgtggatttgaggctctgctcaagagccccgcc
tgcttcaccctgcacgaactcaagcttaacaactgtggcatgggcatcggtggtggcaag
atcctggcagccgctctgaccgagtgccaccggaagtccagcgcccaaggcaagccgctg
gccctcaaggtcttcgtggcgggcagaaaccgtctggagaacgatggcgccactgcgttg
gcagaagcgtttggcattatcgggactctggaggaggtccacatgccgcagaacgggatc
aaccacccgggcgtcaccgcgctggcccaggccttcgccatcaactccctgctgcgggtc
atcaacctgaatgacaacaccttcaccgagaagggcgccgtggccatggctgagaccctg
aagaccttgaggcaggtggaggtgatcaatttcggggactgcctggtgcgctccaagggc
gctgtggccatcgcagatgccgtccgcgggggcctgcccaagctgcaggagctgaacctg
tccttctgtgagatcaagagagatgccgccttggctgtggccgaggccgtggccgacaag
accaagctgaagaagctggatctcaatggcaatgccctgggagacgacggctgcaagcag
ctgcgggaggtcctggacggcttccacatgaccaagatgctggcttccctcagtgatgac
gagggcgaggatgatgaggaagacgacgacgaggaggagggagaagacgaggaggaggag
gaggaagaggaggaggaagaggaagaagaggaggaagacgaggaggaagagccacagcag
gaagggcaaggagaggagtcaaccaccccaaggaagattctggaccccaacagtggagag
ccggctcccgtgctgtcctcgccgccccccacagacgtgcccaccttcctggcattcccc
tccccggagaaactgctgcgcctcgggcccaagggctctgtgctcatcgcccagcagacg
gacacgtcagaccccgagaaggtggtgtgcgccttcctgaaggtggcgtccgtgttcaag
gatgaagcctcggtgagggccgcagtgcacgaggccgtagatgcgctcatgaagaaggcg
ttcggcgcctcgtccttcaactccaacgccttcctcaccaggctgctggtccacatgggt
ctgctcaagagcgaagacaagatcaaagccattcccaacctctacggccccctgatggtg
ctgaatcacgtggtgcagcaggattacttccccaaggccctcacacccctgctgctggca
ttcatgaccaagcccaacggcgccctggaatcctgctccttcgcccgccacaatctgctg
cagacactgtacagcgtctag
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