Perognathus longimembris pacificus (Pacific pocket mouse): 125358047
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Entry
125358047 CDS
T08928
Symbol
Cntn3
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125358047 (Cntn3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
plop00537
]
125358047 (Cntn3)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
Contactins
125358047 (Cntn3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
plop00537
]
Others
125358047 (Cntn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Tissue_fac
C2-set_3
fn3_2
Motif
Other DBs
NCBI-GeneID:
125358047
NCBI-ProteinID:
XP_048210843
LinkDB
All DBs
Position
10:complement(61201527..61418602)
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AA seq
1028 aa
AA seq
DB search
MMLPWKQLILLSFIGCLDGELLLQGPVFIKEPSHSIFPVGSEDKKITFTCEARGNPSPHY
RWQLNGSHIDSSGSHHYKLSGGNLTIMNPNRNWDTGSYQCFATNSLGTIISQEARLQFAY
LENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGH
LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRADGVMGEYEPKIEVQFPEVLPAA
KGSAVKLECFALGNPVPKINWRRSDGMPFPNKIKLRKFNGVLEIPNFQQEDTGSYECIAE
NSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGEALVL
EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSRNPMKKLVQ
VQVGSLVVLDCKPRASPRALSSWKKGDVVVQEHERISLLSDGGLRITNVTKADAGDYTCT
AENQFGRANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGA
LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQSGVDSVSSAAQLIVRGSPGP
PGNVKVDEITDTTAQLSWEEGTDNHSPVMSYAVQARTPFSVGWQTVTTVPEVIDGGTHAA
TVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVIT
WDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNDSIIPFSPYEVKVGV
YNNKGEGPFSPVMTVFSAEEEPTVAPSHVSAQSLSSSEIEVSWNTIPWKLSNGHLLGYEV
RYWNNGGEEESSSKIKVTGNETSARLRGLKSNLVYYTAVRAYNSAGTGPFSDAVNATTKK
TPPSQPPGNVVWNATDTKVLLNWEQVRAMENESEVTGYKVFYRTSSQSNIQVLNTNKTSA
ELLLPIKEDYIIEVKATTEGGDGTSSEQIRIPRITNMDARGSTSSISIVHPMSSYIPMVL
FFIVNALW
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgccatggaaacagttgatcctgctttcattcattggctgcctagacggtgag
ctgctcttacaaggccctgtgtttatcaaggagcccagccatagcattttccctgttggt
tcagaagataaaaagataactttcacctgtgaagcaagaggaaatccttcacctcattac
agatggcagctgaatggaagccatattgatagcagtgggagccatcattataagttgagt
ggaggcaatcttacaatcatgaaccccaacagaaactgggatactggaagttaccaatgc
tttgctacaaattcacttggaacaatcatcagccaagaagccagactccagtttgcttat
cttgaaaattttaaaacaaaaatgaggagtacagtgtcagtacgtgaaggccagggcgtg
gtcctgctctgcggccccccgccacactctggtgaactatcatatgcttggatcttcaat
gagtacccatcgtttgttgaagaagatagccggagatttgtctctcaagaaacgggacac
ctctacatagctaaggtggagccatccgatgtggggaattacacatgtgtggtgacaagt
accgtgaccaatgccagagtcctggggtccccaaccccactggtgctacgggctgatggg
gtaatgggtgaatatgaacccaaaatagaagtgcagtttccagaagttcttcctgcagct
aaaggatctgctgtgaaattggaatgttttgcccttggaaaccccgtacctaagattaat
tggagaaggagtgatggaatgccatttccaaataaaattaaattgaggaagttcaatggt
gtgcttgaaatccccaatttccaacaggaagatacgggttcctacgaatgtattgctgag
aattcaagaggaaaaaatgtggccaggggccgtctcacttactatgcaaagcctcattgg
gttcaacttataaaagatgtggaaattgcagtggaggacagtctttactgggaatgtcgg
gcgagtggaaagcccaagccttcctacaggtggttgaaaaatggagaagccctagtacta
gaggagagaatacaaatagaaaatggtgcccttacaatatcgaacctcaacgtgaccgat
tccggcatgttccagtgcatagcagaaaataaacacggtcttgtctattccagtgctgag
ctcaaagttgttgcctctgctccagacttttcaagaaacccaatgaagaagttggtccag
gtccaggtgggcagcctggtggtcttggattgcaaaccaagagcttcccccagggcactc
tcttcttggaaaaaaggagatgtggtggttcaggagcacgaaaggatttctttgttaagt
gatggaggactcagaataaccaatgtgaccaaggctgatgctggagactacacttgcact
gcagaaaaccagtttggaagagcaaatggtacaacacgcttggttgttacagaaccaaca
agaataacactggcaccttctaacatggatgtttccgtgggcgaaagcgtgattttaccc
tgccaggtgcaacacgaccccttgctagacatcatatttacctggtatttcaatggtgcc
ctcacggattttaagaaagacggctctcactttgagaaagtaggtgggagttcatctggt
gatttaatgatcagaaacatccagttgaagcacagtgggaagtatgtctgtatggtacaa
agtggtgtggacagtgtgtcttctgctgctcagctcatagtaagaggttcacctgggccc
ccaggaaatgtgaaggtagatgaaattacagacacaacggcccagctctcttgggaagaa
ggtacagataatcacagccccgttatgtcctatgcagttcaggctaggacacccttctcc
gtgggctggcagaccgtcacaacagtgcctgaagtcattgatggcggcacacatgcagcc
acagtagtggagttaaacccatgggtggaatatgaattccgtgttgtagccagtaataaa
attggaggtggagagcccagtttaccctcagaaaaagtaagaactgaagaggcagttcca
gaagtacctccttccgaagtcagtggaggaggtggcagccggtcagaactagtgataacc
tgggatccagtccctgaagaactacagaatggtgaaggttttggctatgttgttgctttc
cgcccccttggggttaccaattggatccagacagtggtgacgtctccagacaccccaaga
tacgtctttaggaatgacagcatcataccattctcaccctatgaagtgaaagtgggtgtc
tataataacaaaggtgaaggaccatttagccctgtaatgacagtgttttctgcggaagaa
gagcctacagtcgccccatctcacgtgtctgcccagagcctgtcttcctcagaaattgag
gtgtcatggaacaccattccctggaagttgagcaatggacatttacttggctatgaggtg
cggtactggaataatggaggagaagaagaatcatccagcaagataaaagtgacaggaaat
gagacatcagccaggctccggggcctgaagagcaatctggtgtactacacagctgtcagg
gcttacaacagtgcagggacgggccccttcagtgacgcagttaatgcaaccaccaagaaa
actcctcccagtcagccaccaggaaatgttgtgtggaatgctacggacacaaaagtatta
cttaattgggagcaagtgagagcaatggagaatgaatcagaagtaacaggatataaggtt
ttctataggactagcagtcagagtaacatacaagtgctgaacacaaataaaacgtcagca
gaacttttgctgcccatcaaagaggactacattattgaagttaaagccacaacggaggga
ggagatggtaccagcagtgagcagatcaggattccaagaataaccaatatggacgcacga
ggatccacttcatccatctcgattgtccaccctatgtcaagttatattcctatggtactc
ttctttattgtaaatgctttgtggtaa
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