Perognathus longimembris pacificus (Pacific pocket mouse): 125358073
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Entry
125358073 CDS
T08928
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125358073
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
Contactins
125358073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_C17orf99
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
125358073
NCBI-ProteinID:
XP_048210883
LinkDB
All DBs
Position
10:63713345..64117405
Genome browser
AA seq
1025 aa
AA seq
DB search
MRLPWELLVLQSFMLCLADDYTLHGPVFVQEPSHVMFPLDSEEKKVKLNCEVRGNPKPHI
RWKVNGTDVDIGMGFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY
LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLY
IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKG
ATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGWYECVAENS
RGKNVAKGQLTFYAQPSWIQKINDIHVAMEESVFWECKANGRPKPSYRWLKNGEPLLTRD
RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFTNAELSVIAEGPDFSRTLLKRVTLVK
VGGEVVIECKPKASPRPVYTWRKGREILKENERITISEDGNLRIINVTKSDAGSYTCIAT
NHFGTASSTGNLVVKDPTRVMVPPASMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI
DFDKDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPE
SVTIDEITDTTAQLSWSPGPDNHSPVTMYVIQARTPFSVGWQAVSTVPELIDGKTFTATV
VGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWE
TVPEELQNGRGFGYVVAFRPHGRMIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFN
NKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPLGKNRGRIQGYEVKYW
RHDDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPP
SQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELS
LPFDEDYIIEIKPFSDGGDGSSSEQIRIPKITNSYARGSGASTSNACTLSAISTIMISLT
ARSSL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgccatgggaactgctagtcctgcaatccttcatgttgtgccttgcagatgac
tacacacttcatgggcccgtttttgttcaagaaccaagtcatgtcatgttccctttggat
tccgaggagaaaaaagtgaagctcaattgtgaagtgagggggaatccaaaacctcatatc
aggtggaaggtaaatggaacagacgttgacatcggcatgggtttccgctacagtgttgtg
gaaggcagcttgttgatcaataaccccaataaaacccaagatgccggaacataccagtgc
atagcaacaaactcatttgggaccatcgttagcagagaagcaaagctgcaatttgcttat
ctggaaaactttaagacaaggacaagaagcactgtgtctgttcgtcgaggccagggaatg
gtacttctgtgtggcccaccaccccattctggagagctgagctatgcctggatcttcaat
gaatacccttcctatcaggataatcgtcgctttgtttctcaggagactggaaatctgtat
attgcaaaagtagaaaaatcagacgttggtaattatacctgcgtggttacaaatactgtg
acaaaccacaaggtcctggggccacccacaccactaatactgagaaatgatggggtgatg
ggtgaatatgaacccaaaatagaggtgcagtttccagaaacagtcccgaccgctaaagga
gccacagtcaagctggaatgctttgctttaggaaatccagtaccaactattatctggagg
agagctgatggaaagcccattgcaaggaaagccagaagacacaagtcaaatgggatcctg
gaaattcccaatttccagcaggaagatgctggctggtatgagtgtgtggctgagaactcc
cgaggcaaaaatgtagccaagggacagttgactttctatgctcaacctagttggattcaa
aaaataaatgatattcacgtagccatggaagaaagtgtcttctgggaatgtaaggcgaat
gggaggcccaagccttcatacagatggctaaaaaatggtgaaccactgttaacgagggat
agaattcagattgagcaaggaacactcaacataacaatcgtgaatctctcagatgctggc
atgtatcagtgcgtggcagaaaataagcatggggttatctttaccaacgccgagctcagt
gtcatagctgaaggtccagatttttcaagaacactcttgaaaagagtgactcttgtcaaa
gtgggaggtgaagttgtcattgagtgtaaacccaaagcatctccaaggcctgtctacaca
tggaggaaaggaagggaaatactgaaagaaaatgaaagaattaccatttctgaagatgga
aacctcagaatcattaatgtgactaaatcagatgccggaagttatacctgtatagccact
aaccattttggaactgccagcagtactggaaacttggtagtgaaagatcccaccagggtc
atggtgccccccgccagcatggacgtcactgtgggagagagcattgttctgccctgccag
gtgacacacgaccactcacttgacattgtgttcacctggacttttaatggacacctgatt
gacttcgacaaagatggagaccactttgaaagagttggaggggattcagctggtgatttg
atgatccgaaacatccaactgaagcatgctgggaaatacgtctgcatggtccagacaagt
gtggacagactatctgctgctgcagacctgattgtaagaggtcctccgggtcccccagag
tctgtgaccattgatgaaatcacagacaccactgctcagctttcctggagtcccgggcct
gacaaccatagcccagtcaccatgtatgtcatccaagccaggactccattctccgtgggc
tggcaagcagtcagtacagtcccagaactcattgatgggaagacattcacagcgacggtg
gtgggtttgaacccctgggttgagtatgaattccgcactgtggcagctaatgtgattggc
attggagaacccagtcggccctcagagaaacggaggacagaagaagccctccctgaagtc
accccagctaacgtcagtggtggcggaggcagcaaatctgaactggttataacctgggag
acggtccccgaggaattacagaatggccgaggatttgggtatgtggtggccttccggcca
cacggcagaatgatctggatgctgaccgtcctggcctctgccgacgcctccagatacgtg
ttcaggaatgagagtgtgcgccctttctctccctttgaggtgaaagtgggcgtctttaac
aataaaggagaagggcccttcagccccactacgctggtgtattctgctgaagaagaaccc
accaaaccaccagctagcatctttgctagaagcctttctgccacagatattgaagttttc
tgggcctcccccctggggaaaaatagaggacggattcaaggctatgaggtaaaatattgg
agacacgacgacaaggaagaaaatgctagaaaaatacgcacagttggaaatcagacatca
acaaaaatcaccaacttaaaaggcagtgccctgtatcacttggctgtcaaggcgtataat
tcggcggggacaggcccttccagcgccacggtcaatgtcaccactagaaagccaccacca
agccaaccccctggaaacatcatatggaattcatcggactccaaaattatcctgaactgg
gatcaagtgaaggctctggataatgagtccgaagtaaaaggatacaaagttttgtacaga
tggaaccgacaaagcagcacatctgtcatcgaaacaaataaaacatctgtggagctgtca
ttgcctttcgatgaagattacatcatcgaaattaagccattcagcgacggcggggatggc
agcagcagcgaacaaatccgaattccaaagataacaaattcctatgcaagaggctccggg
gcttccacttcgaatgcgtgtacactgtcagccatcagcaccataatgatctccctcaca
gccaggtctagtttatga
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