Perognathus longimembris pacificus (Pacific pocket mouse): 125358168
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Entry
125358168 CDS
T08928
Symbol
Cntnap4
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125358168 (Cntnap4)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
125358168 (Cntnap4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
125358168
NCBI-ProteinID:
XP_048211045
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All DBs
Position
10:complement(7167900..7406574)
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AA seq
1309 aa
AA seq
DB search
MGSVTGAALRLLLVLWTQNWDRAEAGNSYDCDEPLASALPPAAFSSSSELSSSHGPGFAR
LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTSVATQGGYGSSNWVTSYLLMFSDSGRNW
KQYRQEDSIWGFSGNANADSVVYSRLQPSVKARFLRFLPLEWNPKGRIGMRIEAFGCAYR
SEVVDLDGKSFLLYRFNQNPLSPVKDSISLKFKTMQSDGVLLHQAGPSGDSITLELRGGR
LFLLINSGDARAPSPRSPASLSLGSLLDDQHWHSVLIQRAGKQVNFTVDEHKSRFHAQGE
LYYLDLDYEISFGGIPAPAKSVSFPHKNFHGCLENLYYNDMDIIDLAKQQNPQIIIMGNV
SFICSQPQSVPLTFLSSRSYLILPVSSGEEGISASFQFRTWNAAGLLLFSELQVVSGSLL
LLLSDGQLKLNLHQPGKLPSDITAGAGLNDGQWHSVSVSAKRSHLSLVVDGHSTPASPSL
GPEQIYSAGTYYFGGCPDESSGSRCRTPLAGFQGCMRLISINDREVDLIAVQRGALGNFS
DLQVDSCGISDRCLPNYCEHGGKCSQSWNTFHCNCTDTGYTGATCHSSIYEQSCEAYKHR
GNTSGFYYVDADGSGPLRPFLLYCNMTETTWSVLQHNGSSELTRVRGAPAPSPHAGRFQY
RASAQQLRAAIARAEHCQQELAYYCKRSRLVDQQDGSPLSWWIGMTNETQTYWGGSQPEP
RKCTCGLEGNCIDAHYHCNCDADRNEWTNDTGFLSYKEHLPVTEIVITDTGRPHSEAAYK
LGPLLCRGDRSFWNSASFNTEASYLHFPTFHGEISADVSFFFKTTALSGVFLENLGITDF
IRIELRSPTTVTFSFDVGNGPFEISVQSPTRFNDNQWHHVRVGRNMKEASIEVDQLLPKT
QPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGVTLDLEERATVTPGVQPGCP
GHCGSYGKLCRHGGKCREKPSGFFCDCSASAYTGPFCSHEISAYFGTGSSVIYNFQENYS
LSKNSSSHAASFHGDRKLSREMIEFSFRTTRAPSLLLYMSSFYKEYLSIIIAKNGSLQIR
YKLNKYQEPDVVNFDLKPMADGQLHHVKINREEDMLFVEIDESTRRHVRLSSGTEFSAVK
SLVLGRILEHSGVDQDTALAAAQGFTGCLSAVQFSHVAPLKAALHPSHPTPVTITGHVTE
SSCVAQAGTDATSRERTHSFTDHSGTLDDREPLTNAIKSDSAVIGGLIAVVIFILLCITA
IAIRIYQQKRLYKRNETKRSENVDHAQAVLKSELNIQNTVNENQKEYFF
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggggtctgtcaccggagccgccctccggttgctccttgtgttgtggactcagaactgg
gacagagcagaggctgggaattcgtatgactgcgacgagcccctggcctccgccctgccc
ccggccgccttcagcagctcctccgagctctccagcagccacgggcccggcttcgcccgg
ctgaaccgcagggacggagccggcggctggtctcccctggtgtccaataaataccagtgg
ttgcagattgaccttggagagagaatggaggtcacctctgtggccacccaaggcggttat
gggagctccaactgggtgaccagctatcttctgatgttcagcgacagcggccggaactgg
aaacagtaccgacaggaagacagcatctggggattttcaggaaatgcaaatgcggacagc
gttgtgtactccaggctgcagccttctgtgaaagccaggtttctgcgcttccttcctctt
gagtggaaccccaagggcagaatcgggatgcggattgaggcgtttggatgtgcctaccga
tcagaggtggttgatcttgatggaaaaagtttcctcctctacagattcaatcaaaaccca
ctgagtccagtgaaagatagcatttctttgaaatttaaaaccatgcagagcgatggggtt
ctgctccaccaagcgggcccgagtggcgattccatcacactggagctaagaggaggaaga
ctgtttttacttatcaattcaggtgacgctagagcgccctcccctcgctctccggccagt
ctcagcctgggcagcctgctggatgaccagcactggcattctgtgcttatccagcgtgct
ggcaaacaggtcaacttcacagtggacgaacacaagagtcgtttccacgcacagggagaa
ctctattacctggatcttgattatgagatcagcttcggagggattccagcacctgcaaaa
tctgtgtcattcccgcataaaaattttcacggatgtttagagaatctctattataacgac
atggatatcattgatttggccaagcaacaaaacccccaaatcatcattatgggaaatgtg
tcattcatctgttcacagccacagtcggtgcctctgactttcctgagctctaggagctac
ttaatattgccggtctcttccggagaggaaggaatttcagccagttttcaatttcgcacg
tggaatgcagctggacttttgctgttcagtgaacttcaagtggtttctgggagtctcctc
ctcttgctcagtgatggacaactgaagttgaacctccaccagccaggaaaattacccagt
gacatcacagcaggtgctggattgaatgacgggcagtggcattccgtctccgtgtccgct
aagaggagtcacctgagcctggtggtggacggccattcgacccctgcgtccccttcgctg
ggccctgagcagatttactcagcgggcacctattattttggaggttgccctgatgaaagc
tctggatcccgatgccgaaccccacttgctgggtttcaggggtgcatgcggctcatctcc
atcaacgacagggaggtggatctgatcgcagtgcagcggggggccctggggaacttcagc
gacctccaggtggactcctgcgggatctcggataggtgcttgcccaactactgcgagcac
gggggcaaatgctctcagtcctggaacaccttccactgcaattgcaccgacacaggctac
acaggagccacctgccacagctctatctatgagcagtcatgtgaagcctataagcataga
ggaaacacttccggcttttactacgtagatgctgatggaagtggtcctctaaggccattt
ctcctctactgcaatatgactgagaccacgtggagcgtcctgcagcacaacggctcctcc
gagctgacccgcgtccggggcgcgcccgccccgagcccgcacgccggccgcttccagtac
cgggcgagcgcccagcagctccgggccgccatcgcccgcgccgagcactgccagcaggag
ctggcctactactgcaagcgctcgcggctcgtcgaccagcaagatggaagtcctctgagc
tggtggattggaatgaccaacgaaacccagacttactggggaggttcccaaccggagccc
cggaaatgtacttgtggcttggaagggaactgtattgatgcccattaccattgtaactgc
gacgcggaccgcaatgaatggaccaatgatactggattcctttcttataaagaacaccta
ccagtaacagagattgtgattacagacaccggccggcctcattcagaagcagcttataaa
ctggggcctctgctctgcaggggagacagatcattttggaattcagcttccttcaatact
gaagcttcataccttcattttccaactttccatggagaaattagtgctgatgtgtctttc
ttttttaagacaacagctctatctggagtatttttagagaacctgggaattactgatttc
atacggatagagctacgctctccgaccacagtgaccttttcgtttgatgtgggaaatggg
ccctttgagatctcggtgcagtcacccacccgcttcaatgacaaccagtggcaccacgtc
cgagttggcaggaacatgaaggaggcatccatcgaggtggaccagctcttgccaaagaca
caaccagctccagccgatggccacgttctcctgcagctcaacagccaactcttcgtgggt
gggacggccaccagacagagaggctttctgggctgcatccggtctctgcagctgaacggg
gtaaccttggatttggaagaaagagccacggtgacgcccggcgtgcagccaggttgtccc
ggacattgtggcagctatgggaagctgtgtcgccacggagggaagtgcagagaaaagccc
agtgggttcttctgtgactgctcggcctcggcatacacggggccgttctgctcccacgag
atttctgcctattttggaactggctcatctgtgatttacaattttcaagaaaattattcc
ttaagtaaaaactccagctctcatgctgcttcctttcatggagataggaagctgagcagg
gagatgatcgaatttagcttccgcaccacacgcgccccaagcctgctgctttatatgagt
tccttttacaaagaatacctttcgatcatcattgccaaaaatggaagtttgcaaataagg
tacaagctgaataagtatcaagaacctgatgttgttaactttgacttgaaacccatggcc
gacggacagcttcaccatgtgaagatcaacagagaagaggatatgctttttgtagagatc
gacgagagcacgagacgacacgtccgcctgtcatcaggcacagaattcagtgcagtgaag
tctctggtattgggcaggattttagagcacagtggagtagaccaggacacggcactggct
gcagcccagggcttcacgggctgcctctcggcggtgcagttcagccacgtggctcctctg
aaggccgccctgcaccccagccaccccaccccggtcaccatcacaggacatgtgacagag
tccagctgtgtggcccaggctggcactgatgccacgtcaagggaaagaacgcactcattt
acagatcattctggaactctggatgacagagaacctctcaccaatgccatcaaaagtgac
tctgcggtcattggaggtttgatagctgtcgtgatctttatcttgctctgcatcactgct
atagccattcggatttatcagcagaaaaggttatacaaaagaaatgagacaaaaaggtca
gagaatgtagaccatgcccaggctgttttgaaaagcgagcttaatatacaaaatacagtc
aatgagaatcagaaagagtacttcttctga
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